11 homologs were found in PanDaTox collection
for query gene Shel_08530 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013165  Shel_08530  TIR-like domain-containing protein (DUF1863)  100 
 
 		 875 aa  1782    Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  hitchhiker  0.00563918 
 
 
-
 
NC_009511  Swit_0794  tetratricopeptide TPR_4  36.28 
 
 		 539 aa  104  8e-21  Sphingomonas wittichii RW1  Bacteria  normal  0.674308  normal  1 
 
 
-
 
NC_008347  Mmar10_2638  hypothetical protein  35.33 
 
 		 681 aa  82.8  0.00000000000003  Maricaulis maris MCS10  Bacteria  normal  0.55896  normal  1 
 
 
-
 
NC_008639  Cpha266_0160  TPR repeat-containing protein  35.65 
 
 		 897 aa  69.3  0.0000000003  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_1674  hypothetical protein  32.57 
 
 		 754 aa  62.8  0.00000003  Caulobacter sp. K31  Bacteria  normal  0.204775  normal  1 
 
 
-
 
NC_011758  Mchl_5411  protein of unknown function DUF323  37.5 
 
 		 719 aa  60.8  0.0000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.750734  normal  1 
 
 
-
 
NC_013595  Sros_4614  WD40 repeat-domain-containing protein-like protein  25.67 
 
 		 919 aa  60.1  0.0000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.334314  normal  0.398797 
 
 
-
 
NC_011758  Mchl_5674  WD-40 repeat protein  29.85 
 
 		 973 aa  58.2  0.0000008  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_6227  WD40 repeat-domain-containing protein-like protein  29.3 
 
 		 943 aa  57.8  0.0000009  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.174955 
 
 
-
 
NC_009921  Franean1_4246  WD-40 repeat-containing protein  31.97 
 
 		 958 aa  52.4  0.00004  Frankia sp. EAN1pec  Bacteria  normal  0.713375  normal  1 
 
 
-
 
NC_013595  Sros_0315  WD40 repeat-domain-containing protein-like protein  30 
 
 		 924 aa  45.8  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>