| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08530 |
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| Symbol | |
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| ID | 8394744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 996617 |
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| End bp | 999244 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985613 |
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| Product | TIR-like domain-containing protein (DUF1863) |
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| Protein accession | YP_003143253 |
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| Protein GI | 257063581 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00563918 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGATGCG TCGCCTGCGG CAGCGAGATT GCGGATTACG CCGCATTCTG CCCGCACTGC
GGAGCTCAGC AGCCCTTCGC ACCTTCCTAC GACGAGTACG AATACGTGGC GTTCATCAGC
TACCGCCATG TTGATCGCGA CACCGACCTG GCAAAACGCA TCCAATCCGC CATCGAGGCC
TATCGGTTGC CCCGCGGCGT GAACTCCCCC GCCGCCAGCC GCAAACTCGG ACGCGTCTTC
CGCGACCAGG ACGAACTGCC CGCCTCAGGC GAGCTGCCGA CGCGCATTTC CAACGCCCTG
CGGCGCTCCC GGACGCTCAT CGTCGTCTGT TCGCCTAAGA CTCCGGAAAG CGCATGGGTG
AACCGCGAGG TCGTCGAATT CGCGACCTAC CACGGCCGCG AGCGCATATT CCTCGCGTTG
GCAGACGGTG CCTCCAAAGA AGGAATTCCG CCGGCGCTGT CCCACATCCT GGCGAAAGAC
GCCGACGGGT CGTTCGGGCT TCGGGCAACA AGCCATGTGG CCGCCGACTT CCGCCCCGCA
ACGAACCTGC CCTTCAGGCA GGAAGCCCTC CGACTTATCG CAGGCATCGT GGGCTGCGGC
TTCGACGACC TGCGCCAGCG CGAACGAGTC CGAAAGATCC GCAGAGTCGC AGGCATCGTC
GCCGCCTTCG CCATAGCCGC AACGGCGACC GGATTCTACA CCCACGCCAA GAACGCCCAG
ATCGAAGCCA GTCAGGTCGA AACCCGGCTT GAACAGTCGC GCCATGCGGC AGCAGACGCC
GACGTGTTGC TCGCCTCCGG CGACCGATAC GGGGCGCTCG ACGCCATCCT GGCCACAGTT
TCCGACGACC CGGATGCCCT CACCCCCGAA GCGCAACGCG CCTTGGAGCA GGCTGTCGGC
GCCTACCCTC AATCCGACAT GTGGTGGTCG CCCTGCTACA CGCTCGAGCA TAAACGTCCT
ATTGTGTCCT GGACCGTCAA TCCCGAATAC ACCTGGTTTG CAACCATCGA CGACCGGGCC
GAGATCAACA TCTACGATGC AGCAACCGGT GCATTGCGCG CCACCTGCGA CTTACCCGGC
GATACGCCCT TCGAGCAGAC CCCCGAACTG CTGCGCCTTG CCGCTTGGGG CGATGTGCTC
TATTGCATGG GCACCGGGCA CCCCGGCGTG TTCGCCTGCT TTGACACGAC ATCCGGGCAC
CTCGTGTGGA ACGTCGAGAA CGTCGCAACC TTCGGCCAGA CCGTCTCAGC GGACGGAAAG
AGCTTGGGCT TTGTCGGGCT GGACGGCGAG GACCTGAACG TCGGCGTCGT AGACACGGCC
TCTTCGCACG GCATCGGGAC CAAAACCCTT CCCAATCCGG GACTTGACGA CCCCTCTGCA
ACCATCAGCG CGAACCACGC CTCCGGAACC GAACCTGTGC TCATGGGTTT CGGCACCTTA
GCCTCCGACG TTTTCGTCGC AGCCGGCGAT ACCGTCGCTT ACATCGACAT GGCGGCCGCC
GACGACACCT GCATGCATGC CGCAGCCCTC GCCCATCCGA ATGCGTCATC CCTTGTTGTT
GCAGATGACA TCTGCTTTGT GACCTCCTAC GATGCAGACG CGCTTGCCAG ATCGCTTGCC
ACGCCCTACG CGATCCAGGC CTTCGACGCC GACATGAATC TGATCTGGCA GTTCGACGGC
GAATCGTCGG GGCGCACCGT CGGCACGTCG GGAGATACGG CACTCGACTA CGGCATACCT
CGCGTTTACG GCATCGCCAA TCTAGGCGAG GGTGCCCTGA TTGCAGGAGC AGGCACCTCG
CTTGTCGCCA TCGATCGCAC CGACGGCTCC GTCCTTTACA CAACCGACTT TGAAGCGCCC
ATAGTGCAGG TCGATTTCAT CTGGAGCGAC CAGGAACCGA TTGTCGGAGC GTTGCTTATC
ACGTTGGCAG ACGGAAAAAC CCTCATCCGC CAGCCTCTTG CCCCCGAAGG GTTCGACTCT
ATCATGGACC TTGATTCAGG CCTTCGTCTG GACAGCGCGG GCAACGGCCT GAGCTATGTC
GGCGGCACCC GCACGCCGTT CCTGCACATA GGCCGTTCCG CTGACAACCC GTCGCTCATC
TCCGTATGGC GCACCGACTT GCAATGGAAC GTGCTCGAAA GAACGCCCTG CGCAGACGAC
GCACAGACCG TAGCCGCCGA AGCCCTGCAG CTTACGCAAG ATGCAGCTCT GGACACCATG
CCCGACAGAG CTCGGATCGC CGTCGAATCC CCTGATGGCA TAGGCGTATT CGCGCAGGAC
GAATCAGGGT GCTGCATGCT GCTCGACCCG CAAGGCAATG CCGTGGCAAC CTGCGAAGAG
ACTTTGCCGG CCCTGCATAC GGCAAGGTTC TCAAGCGATG CAACCCGCGT GTTCGCCTCC
ACATACAACC CCGATGCCGA CGCGTCAGAC GACTTCCCCA CGCTCTATGT CCTCCGCATC
GAAGACGGCC GGCTCACCGT CGAAAGCGAA ATCTACTGCG GCATAGCGGT ATCCGCCGAC
GAAACCGAAA TATATGCCGA AGACGCCCTC GGGGTTTTCA CCATGCCCTA CTACAGCCGC
AACCAGCTCG TGGAGTTGGC CTGCAGCATC CTGGCCCAGA CGAAATGA
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| Protein sequence | MGCVACGSEI ADYAAFCPHC GAQQPFAPSY DEYEYVAFIS YRHVDRDTDL AKRIQSAIEA
YRLPRGVNSP AASRKLGRVF RDQDELPASG ELPTRISNAL RRSRTLIVVC SPKTPESAWV
NREVVEFATY HGRERIFLAL ADGASKEGIP PALSHILAKD ADGSFGLRAT SHVAADFRPA
TNLPFRQEAL RLIAGIVGCG FDDLRQRERV RKIRRVAGIV AAFAIAATAT GFYTHAKNAQ
IEASQVETRL EQSRHAAADA DVLLASGDRY GALDAILATV SDDPDALTPE AQRALEQAVG
AYPQSDMWWS PCYTLEHKRP IVSWTVNPEY TWFATIDDRA EINIYDAATG ALRATCDLPG
DTPFEQTPEL LRLAAWGDVL YCMGTGHPGV FACFDTTSGH LVWNVENVAT FGQTVSADGK
SLGFVGLDGE DLNVGVVDTA SSHGIGTKTL PNPGLDDPSA TISANHASGT EPVLMGFGTL
ASDVFVAAGD TVAYIDMAAA DDTCMHAAAL AHPNASSLVV ADDICFVTSY DADALARSLA
TPYAIQAFDA DMNLIWQFDG ESSGRTVGTS GDTALDYGIP RVYGIANLGE GALIAGAGTS
LVAIDRTDGS VLYTTDFEAP IVQVDFIWSD QEPIVGALLI TLADGKTLIR QPLAPEGFDS
IMDLDSGLRL DSAGNGLSYV GGTRTPFLHI GRSADNPSLI SVWRTDLQWN VLERTPCADD
AQTVAAEALQ LTQDAALDTM PDRARIAVES PDGIGVFAQD ESGCCMLLDP QGNAVATCEE
TLPALHTARF SSDATRVFAS TYNPDADASD DFPTLYVLRI EDGRLTVESE IYCGIAVSAD
ETEIYAEDAL GVFTMPYYSR NQLVELACSI LAQTK
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