| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0794 |
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| Symbol | |
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| ID | 5197557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 878990 |
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| End bp | 880609 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580338 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001261299 |
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| Protein GI | 148553717 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.674308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGACCG GTCTTCATGG CGATGCCGAT GCGCGACAGG CGATCGTGAA GACCGACGGA
GCGCCCGGCG AACGCCGCTA TCGCGCGTTC ATCAGCTATA GCCACAGCGA CGAGGCGGCC
GCGCGGCGGC TGCACCGCTG GCTCGAATCC TATCGCATTC CCCGGCGGCT CGTCGGACAG
GGCACGGCGC GGGGCGAGGT GCCCCGGCGG CTGGCGCCGA TCTTCCGCGA CCGGCTCGAA
TTCCCGGCGG CCTCCAGCCT CAACGCGGCG ATCGAGGAAG CGCTCGCCAT GTCGGACGCG
CTGCTGGTGC TCTGCTCGCC GGCCGCGCGC GCCTCGCTGT GGGTCAATGC CGAGATCAGG
CTGTTCCGGC GGCTGCATCC CGATCGCCCG ATCATCGCCG CGCTGCTGAC CGGCGAACCC
GCCGACGCCT TCCCCGAGGC GCTGCTGGAG CCCGATGCGG CGGGCGTCGC CGACGAACCG
GTCGCCGCCG ATTTCCGCCG CAGCCATGAC GGCGCGAAGC TGGCGCGCCT GAAGATCGTC
GCCGGCCTGA CCGGCCTCGC GCTCGACGAA CTGATCCAGC GTGAAGCACA AAGGCAGCTT
CGACGTGTGA TCGCCGTCAC GGTCGCCTCG CTGGCTTTCG CCCTAATCAT GGCGATGCTG
CTCATCTTCG CCATCCTCGC GCGAAGGGAG GCCGAACATC AGCGCCGGCA AGCGGAAGGC
CTGATCGAAT TTATGCTCAC CGACCTCAGG ACCAGATTGC AGGGGGTAGG CAGGCTGGAG
ATCCTCCAAT CGGTGAACGC ACGCGCCCTC GCTTATTATG GCGAGCAGTC GGACCTGAAC
CGGCTGCCGG CGGAATCGCT CGAACGGCGG GCGCGAGTGC TCCACGCGAT GGGCGAGGAC
GACCATAAGC GCGGCGACTA TGCCGCCGCC CTCGCCACCT TCCGCGAGGC GCACCGGGTG
ACGGCGACGC TGCTCGCGGC GAAGCCCGGC GACCCCTTGC GCATCTTCGC CCATGCCCAG
AGCGAGTTCT GGCTGGGCTA TGTCGACTTC GTGCGCTTCC GCTACGCGCG CGCGCTGCCG
CGCTTCGTCG CCTATCGCGA CCTCGCCCGC CGGCTGGTCG CGATCAGCCC CGAAGACCTG
AAATATCGCC GCGAGCTCGG CTATGCGGAG GGCAATCTCT GCACGATCGC GGTGGCGCGC
AAGGGTCCGC CCGCCGATCT CGACGCCTGC GCCGCCGCGC TGGCGACGAT GGAGCATATC
GCGCGGTCGT CGCCCGGCGA TCCCGGCATC CAGAGCGACC TCGCCAACCG CCACGCCTGG
ATGGCCGACG CGCTGCGCCT GACCGGCCAC GACGAGGAGG CGATGGCGCA CCGCGACAGG
CAGCGGGCGA TCATCGACCG GCTGCTCGCC GCCGATCCCA AGAATGCCAG CTATCGCCAG
GACTGGATAT TGTCGCGCTA CTCGACCTCG GAACTGCTCC GCGCGCTCGG CAAGCCGGCC
GAGGCGGACG CGATGATCGC CGAGTCCCGG CGGGTGATCG ACGGCCTGAT CGCCTCCGAT
CCCGAGAATG AGGACTGGCG CGTCTGGCGC GAGAAGCTCA ATCAACCCGA TCCGCAATAG
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| Protein sequence | MGTGLHGDAD ARQAIVKTDG APGERRYRAF ISYSHSDEAA ARRLHRWLES YRIPRRLVGQ
GTARGEVPRR LAPIFRDRLE FPAASSLNAA IEEALAMSDA LLVLCSPAAR ASLWVNAEIR
LFRRLHPDRP IIAALLTGEP ADAFPEALLE PDAAGVADEP VAADFRRSHD GAKLARLKIV
AGLTGLALDE LIQREAQRQL RRVIAVTVAS LAFALIMAML LIFAILARRE AEHQRRQAEG
LIEFMLTDLR TRLQGVGRLE ILQSVNARAL AYYGEQSDLN RLPAESLERR ARVLHAMGED
DHKRGDYAAA LATFREAHRV TATLLAAKPG DPLRIFAHAQ SEFWLGYVDF VRFRYARALP
RFVAYRDLAR RLVAISPEDL KYRRELGYAE GNLCTIAVAR KGPPADLDAC AAALATMEHI
ARSSPGDPGI QSDLANRHAW MADALRLTGH DEEAMAHRDR QRAIIDRLLA ADPKNASYRQ
DWILSRYSTS ELLRALGKPA EADAMIAESR RVIDGLIASD PENEDWRVWR EKLNQPDPQ
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