Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4614 |
Symbol | |
ID | 8667908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5135507 |
End bp | 5138266 |
Gene Length | 2760 bp |
Protein Length | 919 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | WD40 repeat-domain-containing protein-like protein |
Protein accession | YP_003340218 |
Protein GI | 271966022 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.334314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.398797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAGCG ACCCGCCCAA GCGGTATGCG GCGTTCATCT CCTATTCGCA CAGTGCGGAA GGCGCTTTTG CGCCTGCGTT GCAGGAGGGT CTGCAGAGGC TGGCCAAGCC GTGGCGTCGA CAACGGGCGC TGGAGGTGTT TCGCGACCAG ACCGGCCTGG CGGTCAGCGC CGGCCTGTGG CCGAGTATCT GCGCGGCCCT GGACGGCTCG TCCTGGCTGG TGTTGCTGGC CTCGCCGCAG GCGGCGCAGT CGGCCTGGGT GGGCAAGGAG ATCGAACGCT GGATCGCCAC CAAAGGATCG CAGACGATCT TGCCGGTGGT CACCGACGGC ACATGGGTGT GGGACGAGCG GGCCGGTGAC TTCGACCGGG AGGCCTCCAC AGCCGTGCAC CCGGCCCTTC ACGGGGTGTT CGCGGCCGAA CCGCGGCATC TCGATATGAC CTGGGCCAAG CAGGAGACTC ATCTGACGCT GCGTAATCCC CGCTTCCGCG ACGCGGTCGC CGAGCTCGCC GCGCCCATGC ACGGCCTGAC CAAGGACGAA CTCGAAGGCG ATGATGTCCG CCAGCAGCGG CGGACGATCC GGCTGGCGCG CGGCACGGTG GCAGGCCTGG CCGTCTTGAC CTTGGCGGCG TCGAGCGCAG CGGTGGTGGC CGTCAACACC GCTGAACAAG CCGGCGTCCA GCGGCGAAGG GCCGAGGCGC AGAAGAACTT GGCCCTGTCG CGTCAGCTGG TCGCGCAGAG CGAGCAGTTG TGGAGCGCCG ATCCTCTCAC CGCGCGGCGA CTGGCCCTGA CCGCCTATCG GCTGGCTCCC ACCGATGATG CCCGCTACAG CATGCTGGCC GCCATGACCC TTTCCGGGCG CGCCGTCCTC AACGGCCACA CCGACTATGT CCTGGCGGTC GCCTTCAGCC CGGACGGGCG CACCCTGGCC ACCGGCGGAA ACGACAAGAC GATCCGGCTG TGGGAGGTGG CTACTCGCCG CCCGATCGGC GAACCGCTGA TCGGCCACAC CGCCGAGGTC AACGTGGTGG CCTTCAGCCC GGACGGGCGC ACCCTGGCCA CCGGAAGCCG GGACCGAACC GTCCGGCTGT GGGACGTGGC CACCCAGCGC CCGATCGGTG ATGCGTTCAC CAGCTCTGCC GACGAGGTCA ATGCGGTGGC GTTCAGCCCG GACGGGCACA CCCTGGCCAC CAGCGGCGGC GACAACATGA TCCGGCTGTG GGACGTGGCC AGCCGCCGCC CGATCGGCAA ACCGCTGACC GGCCACACCG CCGAGGTCAA CGCGGTGGTC TTCAGCCCGG ACGGGCGCAC CCTGGCCACC GGCGGAGACG ACAACATGAT TCGGCTGTGG GATGCGGCCA GCCGCCGCCC GATCGGCAAA CCCCTGACCG GCCACACTAA AAAGGTCACC TCGGTGGCGT TCAGCCCCGA CGGGCGCACC CTGGCCACCA GCGGCGGCGA CAACATGATC CGGCTGTGGG ATGCGGCCAG CCGCCGCCCG ATCGGCAAAC TCCTGACCGG CCACACGGCG GGAGTCCTCT CAGTAGCCTT CAGCGCGGAC GGGCGCACCC TCGCCAGTGG CAGTCTTGAC CGGTCGATCC GATTGTGGGA TGTGGCCACA CGCAGTTCGA TCGGTGAACC ACTCGTCGGG CACACCGACG CGGTATACGC GGTGGCCTTC AGCGCGGACA ACCGTACCGT GGCCAGCGCC GGATCCGACA CGTCGGTGCG CTTATGGGAC GCCTCAGCCC ATCGCCCGGC CGGTGAACCG CTGACCGGCC ACACCGACGC GGTATACGCG GTGGCGTTCA GCCCCGACGG GCGCACCCTG GCCACCGGCG GCGGCGACAA GACCGTCCGG CTGTGGGACG GCGCCACCCG CCGCCCCATC GGAAAACCGC TGACCGGCCA CACCGACGCG GTCGAGTCGG TGGCGTTCAG CCCTGACGGG CGCACCCTGG CATCCGGCGG AGACGACCAC ACGGTCCGGC TGTGGGAGGT GGCTACTCGC CGTCCGATCG GTGAGCCGAT GAACGGCCCT CTCGCGCTCA GCGTGGACTT CAGTCCGGAC GGTCGCACCC TGGCATCCGG TGGCGGCGAC CACACGGTCC GGCTGTGGGA GGTGGCTACT CGCCGTCCGA TCGGCGAACC GCTGATCGGC CACACCGCCG AGGTCAACGC GGTGGCCTTC AGCCCGGACG GGCGCATCCT GGCCACCAGC GGCGCCGACT ACACGGTCCG GCTGTGGGAT GTCGCCACCC GCCGCCCCAT CGGTGAACCG CTGACCGGGC ACACCGAAAC CGTATGGTCG GTCGCCTTCA GCCCTGACGG GCATATCGTG GCCAGTGCCG CCGGCGACAA CACTGTCCGG CTGTGGGATG TCACCACTCG CCGCCCGATC GGCAATCCCA TGAGCGTGTT TAGCGTCTGG GTCGGCTCGG TGGCGTTCAG CCCCGACGGG CGCATGCTGG CCAGCGCCAG CAGCACCGAC GCGGTGCAGC TGTGGGACGT CGCAACGCGC CGGCCCATCG GCGAAGTGCT GAACGGGCCT GCCGACGTGG TCGGCTCGGT GGCGTTCAGC CCCGACGGGC GCATGCTGGC CAGCGCCAAC TGGGACAACA CGGCGCGGAT ATGGGACCTG ACCGCCTTCA GTAACCCCTT CAAAACCCTG TGCGACGCCG GGGGCTCGCT GCCGTCGGCC GAGTGGAACC GCTACCTTCC CGGGGAGCCC TATCAGCAGT TATGCCCCGG CGTTTCCTGA
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Protein sequence | MGSDPPKRYA AFISYSHSAE GAFAPALQEG LQRLAKPWRR QRALEVFRDQ TGLAVSAGLW PSICAALDGS SWLVLLASPQ AAQSAWVGKE IERWIATKGS QTILPVVTDG TWVWDERAGD FDREASTAVH PALHGVFAAE PRHLDMTWAK QETHLTLRNP RFRDAVAELA APMHGLTKDE LEGDDVRQQR RTIRLARGTV AGLAVLTLAA SSAAVVAVNT AEQAGVQRRR AEAQKNLALS RQLVAQSEQL WSADPLTARR LALTAYRLAP TDDARYSMLA AMTLSGRAVL NGHTDYVLAV AFSPDGRTLA TGGNDKTIRL WEVATRRPIG EPLIGHTAEV NVVAFSPDGR TLATGSRDRT VRLWDVATQR PIGDAFTSSA DEVNAVAFSP DGHTLATSGG DNMIRLWDVA SRRPIGKPLT GHTAEVNAVV FSPDGRTLAT GGDDNMIRLW DAASRRPIGK PLTGHTKKVT SVAFSPDGRT LATSGGDNMI RLWDAASRRP IGKLLTGHTA GVLSVAFSAD GRTLASGSLD RSIRLWDVAT RSSIGEPLVG HTDAVYAVAF SADNRTVASA GSDTSVRLWD ASAHRPAGEP LTGHTDAVYA VAFSPDGRTL ATGGGDKTVR LWDGATRRPI GKPLTGHTDA VESVAFSPDG RTLASGGDDH TVRLWEVATR RPIGEPMNGP LALSVDFSPD GRTLASGGGD HTVRLWEVAT RRPIGEPLIG HTAEVNAVAF SPDGRILATS GADYTVRLWD VATRRPIGEP LTGHTETVWS VAFSPDGHIV ASAAGDNTVR LWDVTTRRPI GNPMSVFSVW VGSVAFSPDG RMLASASSTD AVQLWDVATR RPIGEVLNGP ADVVGSVAFS PDGRMLASAN WDNTARIWDL TAFSNPFKTL CDAGGSLPSA EWNRYLPGEP YQQLCPGVS
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