15 homologs were found in PanDaTox collection
for query gene Sfri_3861 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008345  Sfri_3861  hypothetical protein  100 
 
 
179 aa  363  1e-100  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3606  hypothetical protein  34.66 
 
 
176 aa  89.7  2e-17  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4662  hypothetical protein  30.81 
 
 
188 aa  87.4  9e-17  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_3832  LemA family protein  30.27 
 
 
188 aa  83.6  0.000000000000001  Shewanella sp. MR-4  Bacteria  normal  normal  0.911812 
 
 
-
 
NC_008322  Shewmr7_3925  LemA family protein  30.27 
 
 
188 aa  83.6  0.000000000000001  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_4041  LemA family protein  30.27 
 
 
188 aa  83.6  0.000000000000001  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4246  LemA family protein  30.81 
 
 
188 aa  83.6  0.000000000000001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4380  LemA family protein  30.81 
 
 
188 aa  83.6  0.000000000000001  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_4207  LemA family protein  30.81 
 
 
188 aa  83.6  0.000000000000001  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_4056  LemA family protein  30.39 
 
 
189 aa  80.9  0.00000000000001  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0095  LemA family protein  28.8 
 
 
187 aa  79  0.00000000000004  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0137  LemA family protein  29.48 
 
 
189 aa  76.3  0.0000000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3652  LemA family protein  27.81 
 
 
189 aa  75.9  0.0000000000003  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3560  hypothetical protein  31.58 
 
 
189 aa  73.2  0.000000000002  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0157  LemA family protein  30.11 
 
 
189 aa  72.8  0.000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
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