| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0157 |
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| Symbol | |
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| ID | 5613903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 180321 |
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| End bp | 180890 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640930983 |
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| Product | LemA family protein |
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| Protein accession | YP_001471898 |
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| Protein GI | 157373298 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1704] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGGGT TGCTGTTGGG GTTAGGGCTA CTGGTTATCA TTGCCTACCT TTGGTACGTC
AGTCTGGTTA AAAAGCGCAA TTCTGTTCGC GAAGCTCTAT CCGGTATCGA TGTGCAGTTG
AAAAAAAGAT CTAACCTGGT GCCTAATATT TTAAAAATTG CTCAGAAATT CATGGATCAT
GAAAAGTCCT TATTGACTGA GATCACCGAG CTGCGTGCCC AGGTAGAAAA ATCTTATGAC
ATCGGCGATG CGTCAGCTGT TAAGGAGCAT CTGGTTAAAG CCGAGCTATT GAATGGCAAG
ATGGGTCAGT TGATGGTGAG TGTCGAAAAC TACCCCGAGC TAAAATCCGA CAACACTATG
CTACAAGCGA TGCAGACCTA TAATGAGGTT GAAGCTCATA TCTCTGCTGC TCGCCGATTC
TACAATGCAT CGGTAACTGA GCTAAATAAT GCGGTGGAGA TCTTCCCCGG CTCAATTATC
GCTTCTATGG CGAATATTAA GGTGATGCCT TTCTACGAAG CCGACGAAGC TTCGAAGGCG
CCGGTCGATG CCTCCGATTA CCTGAACTAA
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| Protein sequence | MEGLLLGLGL LVIIAYLWYV SLVKKRNSVR EALSGIDVQL KKRSNLVPNI LKIAQKFMDH
EKSLLTEITE LRAQVEKSYD IGDASAVKEH LVKAELLNGK MGQLMVSVEN YPELKSDNTM
LQAMQTYNEV EAHISAARRF YNASVTELNN AVEIFPGSII ASMANIKVMP FYEADEASKA
PVDASDYLN
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