Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0095 |
Symbol | |
ID | 5078870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 109245 |
End bp | 109808 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640497215 |
Product | LemA family protein |
Protein accession | YP_001181630 |
Protein GI | 146291206 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAT TTCTTTTAGG GTTATCGCTC GTTTTTATCG TGGCTTACCT TTGGTATGTT AGCCTAGTCA AAAAACGGAA TACTGCACTT GAAGCTCTGT CGGGTATCGA TGCACAGCTT ACCAGCCGCA ATGAATTTAT ATACAGGGTC CTTGAAATTG CGGGCCAACA TAAACATGAT GAGCTGTTAT TTAAAGAAAT TAATGAGTTA CTGACAACCT CTGCTTCCGC TTATCGCATG TTTGATCCTC AAGAAGTGAA AGTACATTTT ATTAATGCAG AGCAGTTGAA TCATAAAATG GCTAAGTTAG TCGCCAATAT TGATGATTAT CCCGATCTGA AATCCGATAA TACTATGCTG GAGGCGATAC AAAACTATAG CGAAGCTGAG TCTGATATCG CGAATGCCAG CCGTTTTTAC AACTTAGCAG TATCTGAATT GAATACAGCG GTTGAAATCT TCCCCGGTTC GATTATTGCC TCAATGGCGA GTATTAAGGT TATGCCTCTC TTTGAACTGA TTGAGGTTCC CAAGGTTCCT ATGGATGCTG TTGATTATCT ATAA
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Protein sequence | MDKFLLGLSL VFIVAYLWYV SLVKKRNTAL EALSGIDAQL TSRNEFIYRV LEIAGQHKHD ELLFKEINEL LTTSASAYRM FDPQEVKVHF INAEQLNHKM AKLVANIDDY PDLKSDNTML EAIQNYSEAE SDIANASRFY NLAVSELNTA VEIFPGSIIA SMASIKVMPL FELIEVPKVP MDAVDYL
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