Gene Shewmr7_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3925 
Symbol 
ID4257818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4662609 
End bp4663175 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content48% 
IMG OID638124614 
ProductLemA family protein 
Protein accessionYP_739959 
Protein GI114049409 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAC TGTTATTAGG ATTAGCGCTG ATTTTTATCG TCACCTATCT TTGGTACGTC 
AGCCTAGTCA AAAAGCGCAA TACCGCCCTC GAAGCCCTGT CGGGAATCGA TGTGCAGTTA
GCCAAGCGCG CCGATCTTGT GCCCAATATC CTCAAAATCG CCAAGCGATT TATGGATCAT
GAAAAGTCAT TACTCACTGA AATCACTGAG CTTCGCACGC AATTAACTCG CAATTACAAC
AAGACAGATC CGAATGCGGT GAAAGAGCAT ATCGCGCAAG CCGAGAAGCT GAACGATAAA
ATGGGTGCCT TGATGGTGAG CGTTGAAAGC TATCCCGAGC TGAAGTCGGA CAACACTATG
CTCGAGGCGA TGCAAACCTA TAACGAGGTC GAAGCCCATA TCTCCGCTGC CCGTCGTTTC
TATAACTCGG CGGTGTCTGA GTTAAATACT GCCGTTGAGA TTTTCCCCGG GTCGATTATT
GCGTCGATGG CAAACATTAA GGTGATGCCA TTCTACGAGG TGAATGAAGC CTCTAAAGCG
CCGATAGACG CGGCGGATTA TCTGTAA
 
Protein sequence
MDKLLLGLAL IFIVTYLWYV SLVKKRNTAL EALSGIDVQL AKRADLVPNI LKIAKRFMDH 
EKSLLTEITE LRTQLTRNYN KTDPNAVKEH IAQAEKLNDK MGALMVSVES YPELKSDNTM
LEAMQTYNEV EAHISAARRF YNSAVSELNT AVEIFPGSII ASMANIKVMP FYEVNEASKA
PIDAADYL