Gene Spea_4056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4056 
Symbol 
ID5664440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4927424 
End bp4927993 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content47% 
IMG OID641238720 
ProductLemA family protein 
Protein accessionYP_001503901 
Protein GI157963867 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGGT TATTGTTGGG ATCAGGCTTA GTGGTGATTA TTGCCTATCT TTGGTATGTC 
AGTTTAATCA AGAAGCGTAA TGCGGGGCGT GAAGCGTTAT CGGGAATAGA CGTTCAGCTT 
AAGAAGCGGT CTAACCTAGT ACCGAATATC CTCAAGATTG CACAGAAGTA CATGGACCAT 
GAGAAGTCGC TGCTGACCGA GATCACCGAA TTAAGAACTT TGGCTGTTAA GGGGTATGAC 
GATGGTGACT CAGGTTCAGT TAAAGCTCAT CTTCAGGTAT CAGAAAAACT GAATCAGAAG 
ATGTCACAGC TGATGGTAAG TGTTGAAAAC TATCCTGAGC TGAAGTCAGA CAATACCATG 
CTGCAAGCGA TGCAGACCTA CAACGAAGTC GAGGCTCAGC TGTCTGCTGC GCGTCGTTTC 
TACAACTCGG CAGTATCTGA GCTGAATACC GCGGTTGAGA TCTTCCCTGG CTCTATCATA 
GCCTCTATGG CGAGTGTGAA GGTGATGCCT TTCTATGAAG CCGACGAGGC GTCTAAAGCA 
CCTGTCGATG CTGCCGATTA TCTAAAATAG
 
Protein sequence
MEGLLLGSGL VVIIAYLWYV SLIKKRNAGR EALSGIDVQL KKRSNLVPNI LKIAQKYMDH 
EKSLLTEITE LRTLAVKGYD DGDSGSVKAH LQVSEKLNQK MSQLMVSVEN YPELKSDNTM 
LQAMQTYNEV EAQLSAARRF YNSAVSELNT AVEIFPGSII ASMASVKVMP FYEADEASKA 
PVDAADYLK