20 homologs were found in PanDaTox collection
for query gene Sbal_4011 on replicon NC_009052
Organism: Shewanella baltica OS155



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011663  Sbal223_3912  diguanylate cyclase/phosphodiesterase with GAF sensor  97.32 
 
 
2649 bp  4682    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_4011    100 
 
 
2650 bp  5253    Shewanella baltica OS155  Bacteria  normal  0.0666458  n/a   
 
 
-
 
NC_009665  Shew185_3989  diguanylate cyclase/phosphodiesterase with GAF sensor  97.74 
 
 
2649 bp  4770    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4105  diguanylate cyclase/phosphodiesterase with GAF sensor  98.57 
 
 
2649 bp  4944    Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3598  diguanylate cyclase/phosphodiesterase with GAF sensor  79.08 
 
 
2634 bp  456  1e-125  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3649  diguanylate cyclase/phosphodiesterase with GAF sensor  77.71 
 
 
2631 bp  252  4.9999999999999997e-64  Shewanella sp. MR-7  Bacteria  normal  0.02582  normal 
 
 
-
 
NC_008577  Shewana3_0375  diguanylate cyclase/phosphodiesterase with GAF sensor  77.86 
 
 
2631 bp  250  1.9999999999999999e-63  Shewanella sp. ANA-3  Bacteria  normal  0.413916  normal 
 
 
-
 
NC_008321  Shewmr4_0377  diguanylate cyclase/phosphodiesterase with GAF sensor  77.78 
 
 
2631 bp  242  4e-61  Shewanella sp. MR-4  Bacteria  normal  0.0140415  normal 
 
 
-
 
NC_004347  SO_4324  GGDEF domain-containing protein  79.38 
 
 
2631 bp  153  3e-34  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_3265  GGDEF domain-containing protein  86.52 
 
 
2589 bp  81.8  0.0000000000009  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00136665  normal 
 
 
-
 
NC_008345  Sfri_0429  diguanylate cyclase/phosphodiesterase with GAF sensor  91.07 
 
 
2625 bp  71.9  0.0000000009  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0469  diguanylate cyclase/phosphodiesterase with GAF sensor  88.06 
 
 
2625 bp  69.9  0.000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2805  diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s)  93.33 
 
 
2637 bp  65.9  0.00000006  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0866778 
 
 
-
 
NC_012850  Rleg_2134  diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  94.44 
 
 
2292 bp  56  0.00005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.489481  normal  0.0897813 
 
 
-
 
NC_010623  Bphy_4472  diguanylate cyclase  90.91 
 
 
1131 bp  56  0.00005  Burkholderia phymatum STM815  Bacteria  normal  0.654938  normal  0.87848 
 
 
-
 
NC_009484  Acry_0490  diguanylate cyclase/phosphodiesterase  90.91 
 
 
2229 bp  56  0.00005  Acidiphilium cryptum JF-5  Bacteria  normal  0.0534462  n/a   
 
 
-
 
NC_007954  Sden_0407  GGDEF domain-containing protein  90.91 
 
 
2622 bp  56  0.00005  Shewanella denitrificans OS217  Bacteria  normal  0.0669941  n/a   
 
 
-
 
NC_008577  Shewana3_3829  diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  90.48 
 
 
4518 bp  52  0.0008  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0306  diguanylate cyclase/phosphodiesterase with GAF sensor  93.94 
 
 
2649 bp  50.1  0.003  Shewanella loihica PV-4  Bacteria  normal  0.212751  normal 
 
 
-
 
NC_010725  Mpop_2088  diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  90.24 
 
 
2103 bp  50.1  0.003  Methylobacterium populi BJ001  Bacteria  normal  0.133326  normal 
 
 
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