| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2134 |
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| Symbol | |
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| ID | 8013153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 2124809 |
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| End bp | 2127100 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644824720 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002975950 |
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| Protein GI | 241204854 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.489481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0897813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTGA AGAAAGCCCA TCCAGAGGCC GGTGATCCGC ATGGCGATGC GGCTGAGGCA
GGTATCGGCA ATGGGCCGAC CGACGATTCC GACCTGGCAG AGCGGGAAAC CCGCTGGAAC
CATGCGCTCG TCGGCTCGGG CCTTGGCGTA TGGGATCACA ACTACCGTCT CGACCGGAAA
TATTACTCGC AGACGTGGAA AACCATCCGC GGCATGGCAC CCGACGAAGA AGCCGCCGGC
GAATACGATA CCTGGCTGCA GTTGGTCCAT CCCGATGATC GCGATTTCGT CGTCCATGCG
ATCGACCGGC AGAATGCCGG CGATCCGCAT TACCAGATCT TCGAATATCG CGAGCGTCAC
AAGGATGGCC ACTGGGTCTG GATCGAGTGT CGCGGCGCCT GCGTGGAATG GGACGAGAAT
GGCGTGCCGA CGCGCATCGT CGGCACGGAT ACCGATATCA CCGCCCGCAA GCAGGCCGAG
GAGACGCTGT CGCGTTTGTC GCGCCGGCTC GATCTGGCGC TGGAGATTTC CCGCATCGGC
GTCTTCGAGG CGGATATCGA GCATGATACC GTCGAATGGG ACGACCGCCT CATTGCCATT
TACGGGCTGC AGGGCGCCTC ACGCCAGATC GCCAGCGACG CCTGGGCGAA AAGCCTGCAT
CCCGACGACC GCGAGCGTGT GCTTGGCTTG TCGGACCGTA GCGTCGAAAG CGGCAGTGAT
TTCCAGCAGG AATACCGCAT CATCCGCGGC GACGGCGCCG AACGCGTCAT CCGCGCCCGC
TCGGCCTTCT TCATCGACGG CAACGGCCAC CGCAAGCTGA TCGGCGCCAA CTGGGACGTC
ACCGAGGAAG TCGCACTGCG CAACGAGCTG CGCCGTGCCA AGGATCTGGC CGAGGCGCGC
AACCGCGAGC TCGAAGCCGC CAAGGAGAGC ATCGAGCATC TGGCGTTGCA CGATTACCTC
ACCGGCCTGC CGAACCGCCG CTATCTCGAC AAGATGCTGG ACGAGCGTGC GGCCGAATGC
CGGGCCAAGG GCATGGCGAT GGCGATCCTG CATATCGATC TCGACCGCTT CAAGCAGATC
AACGACACGC TCGGCCACCG GGCCGGCGAT GCCATGCTGC AGCATGCCGC AAGCGTGCTG
AGAACGTCCG TCCGCGCCGT CGACTTCGTG GCCCGCATCG GCGGCGACGA ATTCGTCATC
CTCTGCATCG TCGATCCCGC ATCGAAGAAG ATCGCCAGTC TTGCCGAACG TGTCATCCGC
GAATTGCGCA AACCCGTCAG ATATGAGGGA CACGATTGCC GTTTCGGCGC CAGCATCGGC
ATCGCCATCG ATAGCGGACC GACGCTCGAC GCCAAGCAGA TGCTGCTCGA CGCCGATATC
GCCCTCTACC GTGCCAAGGG CCTAGGCCGC AACCGCTTCG AATTCTTCTC GGCCGCTGCC
CGCCGCGACA TCATCTCCGC CAAGCACCTT GCCGACGAGA TCTTGATCGG TCTTGAGCGC
AATGAATTCG TGCCTTTCTA TCAGCTGCAG TTCGATGCCC GCACGCTCGA TGTCGCAGGC
GTCGAAACAC TTGCCCGCTG GCAGCACCCT GTGCACGGGC TGCTGACGCC CGACCGCTTC
CTCGACATTG CAGAGGATCT CGACGTCGTC TCGACTATCG ACGCCCTCAT CCTGGAGCGT
GCCATTGCCG ACCGGAAGGT GTGGCTGAAG GACGGGCTGC CGATCCCGAA GATATCGGTC
AACGTCTCCG CCAGGCGGCT CGCCGATCCC GATCTGGGCA AAAAGCTCCG CGCCTTGAAG
ATTGAGCCCG GCACCTTCTC CTTCGAGCTG CTGGAATCGA TCTCGCTCGA CGATTGCGAC
GAGGCGGTGG TCGCCAACCT GAAAAAGCTG CGCAAGCTCG GCATCGACAT CCAGATCGAC
GATTTCGGCA CCGGCCATGC CTCGATCGTC AGCCTGCTGC GCCTGAGCCC GAAGACGCTG
AAGATCGACC GCGAGCTGAT CCGCATGCTG CCGCAATCGG CAGAGCAGCG CAAACTGGTC
GGCTCGATCA TCGATATCGG TCGCTCGCTG AACATCCTCG TCATCGCCGA GGGCGTCGAG
ACGGCGGAGC ATATCCGCAT TCTCGAAGAA CTCGACTGTG ACACGCTGCA GGGCTACGCG
CTCGCCCGGC CGATGCCGGC CATGCAGATC CCCTCCTTCA TCCGCGCCGG AAGCTGGCGC
CACGGGCAAA TCGCCGCTCG CGCCTTGCAG GCGCAGCTTC GCCGCGCCCT GCCAGGCAGA
GCCGCCAAAT AA
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| Protein sequence | MPVKKAHPEA GDPHGDAAEA GIGNGPTDDS DLAERETRWN HALVGSGLGV WDHNYRLDRK
YYSQTWKTIR GMAPDEEAAG EYDTWLQLVH PDDRDFVVHA IDRQNAGDPH YQIFEYRERH
KDGHWVWIEC RGACVEWDEN GVPTRIVGTD TDITARKQAE ETLSRLSRRL DLALEISRIG
VFEADIEHDT VEWDDRLIAI YGLQGASRQI ASDAWAKSLH PDDRERVLGL SDRSVESGSD
FQQEYRIIRG DGAERVIRAR SAFFIDGNGH RKLIGANWDV TEEVALRNEL RRAKDLAEAR
NRELEAAKES IEHLALHDYL TGLPNRRYLD KMLDERAAEC RAKGMAMAIL HIDLDRFKQI
NDTLGHRAGD AMLQHAASVL RTSVRAVDFV ARIGGDEFVI LCIVDPASKK IASLAERVIR
ELRKPVRYEG HDCRFGASIG IAIDSGPTLD AKQMLLDADI ALYRAKGLGR NRFEFFSAAA
RRDIISAKHL ADEILIGLER NEFVPFYQLQ FDARTLDVAG VETLARWQHP VHGLLTPDRF
LDIAEDLDVV STIDALILER AIADRKVWLK DGLPIPKISV NVSARRLADP DLGKKLRALK
IEPGTFSFEL LESISLDDCD EAVVANLKKL RKLGIDIQID DFGTGHASIV SLLRLSPKTL
KIDRELIRML PQSAEQRKLV GSIIDIGRSL NILVIAEGVE TAEHIRILEE LDCDTLQGYA
LARPMPAMQI PSFIRAGSWR HGQIAARALQ AQLRRALPGR AAK
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