| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0490 |
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| Symbol | |
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| ID | 5161648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 543623 |
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| End bp | 545851 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640552406 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001233633 |
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| Protein GI | 148259506 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0534462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGCAAC GGAAGGACAA TCGAACGAGC CTCGCCTTCG TGCTGACGCG CGCCGTTCCG
GCGCTGCTGC TGACCCTGGC TGCCGGCGGG CTTGCCTTCC TGCTCCTCGC CTGGGCGGCC
CATCAGTCCG ACCGCGTCTC CTTCCAGCGG CAGGAAAGGC TGGTCGCCCT CGTCGTCTCG
CAGCTGCGCT CGCAGGTTGC GCACGACCAG GAAAGCTCGA CGGTGTGGGA CACTGCGGTG
GAGAAGGTCC GCGCCGACGA CACGCACTGG ATCGACGACA ATCTCGGCAC CTGGATGCAC
AGTTACTTCG GGTTCGACGG CGCCTATGTG CTGAACCCCG AAAACCGCCC GATCTACGCC
TTCGCCAATG GGAGGATGAC GTCCCCCGCC GCCTATGACG CGATCCGCGG ACAGGTCGCG
CCGCTCGTCC ACGCCCTGCG GCATGACATG CGCGATGGCC ATGCTACGGG GCAGGGCGGC
AAGTTCCTCT CGCCCGGCAT TGCCGATCTT GCGGTTGTCA GCGGCCATCC CGCGGTCATC
AGCGTCAAGC CCATCGTCTC GGATACCGGC AAGATCCGGC AGGCGCCCGG CACCGAATAT
CTGCACGTCG CCGTCCGCTT CCTCGACGGC TCCTTCGCCC GCCGGCTGAC GCGCGACTAT
CTTTTCAATG GCCTGCATTT CGCCTGGACT CCGGCGCACG GCCCCGGCGC CGCCGCCTAC
CCGGTCGACG ACAATGCCGG CAAGCGAATC GGCTATTTCA TCTGGCGCCC CTACCGCCCC
GGCACGGCGG TGCTGTCGCG GGCGATGCCG ATCCTCGGCG GGCTGCTCGC CCTGGCGCTG
CTCACCGTCG CCGGCTTCCT CGCCGTCGTC CGCAGCCGCT CGCTCCGGCT ACAGGCGAGC
GAGGTGCGGA TCCATCACCT CGCGTTTCAC GATCCGCTGA CGGGCCTGCC CAATCGCACC
TTCTTCAACG AGAGCGCCGA TGCCGCCCTC GCCGCGCTGT CCGGGACCTC GATCGCGCTG
CTCTTTCTCG ATCTCGACCG CTTCAAGCAG GTGAACGACA CGCTGGGCCA TCCCGCCGGC
GACACGCTGA TCCGCGAATT TGGCGCACGC CTCCGCGCCC TGGTCCGCGA GGAGGACATG
GTCGCCCGCG TCGGCGGCGA CGAATTCACC GTCATGCTCG CTGGTGTTGC CGGGCGCGAG
GATGTGGAGA AGCTCTGCGC GCGCATCGTC GAGTCCGTCC GCACCCCCTT CGATCTTAAT
GGCAACCGTG TGTTCGTCGG GCTGAGCATC GGCGTCGCTC TCGCACCGGA TCATGGCACG
GACCGTATTG ACCTGCTCCG CAAGGCCGAC ATCGCCCTCT ACAGTGCCAA ATCCACCGGG
CGCGGCCGCT TTGCGTTCTT TGACCCGGTC ATGGACGACG CGCTCCGCCT TCGCCGCGAA
ATCGAGGCCG ACCTGCGCGC TGCCCTGCAG GAAAGCGGCG AGATCGTGCC GTATTACCAG
CCCATTCACG CCGCCGCCGG CCATACCATT ACCGGGTTCG AGGCGCTGCT GCGCTGGCGC
CACCCCGCGC TCGGCTGGAT CTCGCCCGAC CTGTTCATCC CCATCGCCGA GGAAGCCGGC
CTGATCGAGA TGATGGGCGA GCGCGTGCTC CGCGAGGCCT GCACTGCCGC GGTCAACTGG
CCGAACCGCA CCATCGCGGT GAACGCCTCC GGCCCCGAAC TCGCCAATCC CGGCTATGCC
GAGCGGGTCG CCGCCATCCT GCGCGTCACC GGCCTGCCGC CGCAGCGCCT CGAGATCGAG
ATCACCGAAA CCGCCGCCAA CGGCCAGATC GGCACCGCAG CCGAGAACCT CGCATCGCTC
CGGGCAATGG GGGTCCGCAT CGCCATCGAC GACTTCGGCA CCGGTTTCTC TTCGCTTGCC
CGCCTCCAGC AGCTCCGGGT CGACCGCGTC AAGATCGACC GCAGCTTTAT TCACGGCTTC
GGCGACCAGG ACAGCGACGA GGTCATTGTC CGGGCGATCA TCGAGCTCGC CCACGCCCGG
GGGCTGCGCG TCACCGCCGA GGGCGTCGAG ACACTGGAAC AGCGCGAGGG CCTCGCGCGG
ATCGGCTGCG ACGATCTCCA GGGCTTCATC TTCTCGAAGG CGCGACCTGC CCCCGAAATC
GACAGACTCG TCGAGGCCGA CGACGCGCCT GCGAACGATA TGCCCGCACC GCGGGGCCGT
ACCGCCTGA
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| Protein sequence | MLQRKDNRTS LAFVLTRAVP ALLLTLAAGG LAFLLLAWAA HQSDRVSFQR QERLVALVVS
QLRSQVAHDQ ESSTVWDTAV EKVRADDTHW IDDNLGTWMH SYFGFDGAYV LNPENRPIYA
FANGRMTSPA AYDAIRGQVA PLVHALRHDM RDGHATGQGG KFLSPGIADL AVVSGHPAVI
SVKPIVSDTG KIRQAPGTEY LHVAVRFLDG SFARRLTRDY LFNGLHFAWT PAHGPGAAAY
PVDDNAGKRI GYFIWRPYRP GTAVLSRAMP ILGGLLALAL LTVAGFLAVV RSRSLRLQAS
EVRIHHLAFH DPLTGLPNRT FFNESADAAL AALSGTSIAL LFLDLDRFKQ VNDTLGHPAG
DTLIREFGAR LRALVREEDM VARVGGDEFT VMLAGVAGRE DVEKLCARIV ESVRTPFDLN
GNRVFVGLSI GVALAPDHGT DRIDLLRKAD IALYSAKSTG RGRFAFFDPV MDDALRLRRE
IEADLRAALQ ESGEIVPYYQ PIHAAAGHTI TGFEALLRWR HPALGWISPD LFIPIAEEAG
LIEMMGERVL REACTAAVNW PNRTIAVNAS GPELANPGYA ERVAAILRVT GLPPQRLEIE
ITETAANGQI GTAAENLASL RAMGVRIAID DFGTGFSSLA RLQQLRVDRV KIDRSFIHGF
GDQDSDEVIV RAIIELAHAR GLRVTAEGVE TLEQREGLAR IGCDDLQGFI FSKARPAPEI
DRLVEADDAP ANDMPAPRGR TA
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