23 homologs were found in PanDaTox collection
for query gene Pcar_0958 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007498  Pcar_0958  hypothetical protein  100 
 
 
181 aa  370  1e-102  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2985  CRISPR-associated Cse2 family protein  52.13 
 
 
192 aa  186  1e-46  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2478  CRISPR-associated protein, Cse2 family  54.55 
 
 
188 aa  180  1e-44  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3136  Cse2 family CRISPR-associated protein  40.11 
 
 
186 aa  107  7.000000000000001e-23  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.776659  normal 
 
 
-
 
NC_011205  SeD_A3253  crispr-associated protein, Cse2 family  40.11 
 
 
186 aa  107  8.000000000000001e-23  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.872797  normal  0.58166 
 
 
-
 
NC_011149  SeAg_B3070  crispr-associated protein, Cse2 family  36.26 
 
 
182 aa  103  2e-21  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3061  CRISPR-associated Cse2 family protein  37.02 
 
 
178 aa  100  1e-20  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2887  CRISPR-associated Cse2 family protein  39.56 
 
 
178 aa  96.7  2e-19  Escherichia coli SMS-3-5  Bacteria  normal  0.680998  normal 
 
 
-
 
NC_011353  ECH74115_4012  CRISPR-associated protein, Cse2 family  35.91 
 
 
178 aa  86.3  2e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.113607  normal 
 
 
-
 
NC_013421  Pecwa_0399  CRISPR-associated protein, Cse2 family  32.4 
 
 
211 aa  83.6  0.000000000000001  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00469479  n/a   
 
 
-
 
NC_011832  Mpal_1606  CRISPR-associated protein, Cse2 family  35.71 
 
 
178 aa  81.6  0.000000000000005  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.823422 
 
 
-
 
NC_011094  SeSA_A3096  crispr-associated protein, Cse2 family  33.75 
 
 
200 aa  78.6  0.00000000000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  hitchhiker  0.00223272  normal 
 
 
-
 
NC_012880  Dd703_3589  CRISPR-associated protein, Cse2 family  46.94 
 
 
219 aa  77.8  0.00000000000008  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0595  hypothetical protein  34.85 
 
 
143 aa  77.4  0.0000000000001  Methanococcoides burtonii DSM 6242  Archaea  decreased coverage  0.000000000000035066  n/a   
 
 
-
 
NC_011080  SNSL254_A3152  CRISPR-associated protein Cse2 family  32.73 
 
 
200 aa  75.5  0.0000000000004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.817058 
 
 
-
 
NC_009654  Mmwyl1_3546  CRISPR-associated Cse2 family protein  32.73 
 
 
206 aa  75.1  0.0000000000006  Marinomonas sp. MWYL1  Bacteria  normal  0.407914  normal  0.0760503 
 
 
-
 
NC_011138  MADE_00867  CRISPR-associated protein, Cse2 family  33.33 
 
 
189 aa  74.3  0.0000000000008  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0228  hypothetical protein  31.79 
 
 
230 aa  71.2  0.000000000007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_1379  hypothetical protein  26.83 
 
 
174 aa  58.5  0.00000005  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.00330561  normal  0.354679 
 
 
-
 
NC_007519  Dde_0863  hypothetical protein  29.57 
 
 
168 aa  53.1  0.000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5413  CRISPR-associated protein, Cse2 family  27.78 
 
 
205 aa  47.8  0.0001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009468  Acry_3316  hypothetical protein  28.47 
 
 
179 aa  45.4  0.0004  Acidiphilium cryptum JF-5  Bacteria  normal  0.531087  n/a   
 
 
-
 
NC_011365  Gdia_0426  CRISPR-associated protein, Cse2 family  30.25 
 
 
196 aa  45.1  0.0006  Gluconacetobacter diazotrophicus PAl 5  Bacteria  hitchhiker  0.00624745  normal  0.0771696 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>