25 homologs were found in PanDaTox collection
for query gene PA14_60810 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008463  PA14_60810  putative transcriptional regulator NfxB  100 
 
 
172 aa  345  2e-94  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5237  transcriptional regulator NfxB  79.39 
 
 
206 aa  245  2e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_60860  transcriptional regulator NfxB  61.54 
 
 
187 aa  211  2.9999999999999995e-54  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5241  transcriptional regulator NfxB  57.65 
 
 
199 aa  199  9.999999999999999e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2759  LacI family transcription regulator  60.95 
 
 
198 aa  197  5e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2755  LacI family transcription regulator  56.63 
 
 
187 aa  189  1e-47  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0367179  normal 
 
 
-
 
NC_010322  PputGB1_2430  regulatory protein LacI  56.1 
 
 
185 aa  177  8e-44  Pseudomonas putida GB-1  Bacteria  normal  0.633892  normal 
 
 
-
 
NC_002947  PP_2820  transcriptional regulator NfxB  52.66 
 
 
185 aa  172  1.9999999999999998e-42  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2594  transcriptional regulatory protein NfxB  46.43 
 
 
184 aa  151  4e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2284  transcriptional regulatory protein NfxB  45.45 
 
 
196 aa  150  5.9999999999999996e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.000917221 
 
 
-
 
NC_010002  Daci_5859  transcriptional regulatory protein NfxB  46.47 
 
 
188 aa  138  3e-32  Delftia acidovorans SPH-1  Bacteria  normal  0.731668  normal 
 
 
-
 
NC_002947  PP_2816  transcriptional regulator NfxB, putative  48.15 
 
 
188 aa  133  9.999999999999999e-31  Pseudomonas putida KT2440  Bacteria  normal  0.308594  normal 
 
 
-
 
NC_009654  Mmwyl1_0287  TetR family transcriptional regulator  38.32 
 
 
181 aa  106  1e-22  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1734  transcriptional regulator NfxB  32.94 
 
 
188 aa  77.4  0.00000000000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.413986 
 
 
-
 
NC_008726  Mvan_0665  TetR family transcriptional regulator  32.92 
 
 
179 aa  74.7  0.0000000000006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.950622  normal  0.396489 
 
 
-
 
NC_009338  Mflv_0240  TetR family transcriptional regulator  35 
 
 
180 aa  71.6  0.000000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.477242  normal 
 
 
-
 
NC_010717  PXO_00232  hypothetical protein  30.77 
 
 
192 aa  69.7  0.00000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0473  TetR family transcriptional regulator  34.76 
 
 
186 aa  68.6  0.00000000005  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_0495  TetR family transcriptional regulator  34.76 
 
 
186 aa  68.6  0.00000000005  Mycobacterium sp. KMS  Bacteria  normal  normal  0.595524 
 
 
-
 
NC_008146  Mmcs_0484  TetR family transcriptional regulator  34.76 
 
 
186 aa  68.6  0.00000000005  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1275  transcriptional regulator, TetR family  32.26 
 
 
193 aa  55.8  0.0000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.0714777  normal  0.0115307 
 
 
-
 
NC_013595  Sros_6310  putative transcriptional regulator, TetR family  32.16 
 
 
185 aa  47.4  0.00009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.523655  normal  0.0800729 
 
 
-
 
NC_013595  Sros_4085  putative transcriptional regulator, TetR family  28.06 
 
 
232 aa  42.7  0.003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.750305  normal 
 
 
-
 
NC_012669  Bcav_0928  transcriptional regulator, TetR family  31.25 
 
 
184 aa  42  0.005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.312785  normal 
 
 
-
 
NC_013235  Namu_1993  transcriptional regulator, TetR family  41.54 
 
 
202 aa  41.2  0.008  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00019531  normal  0.0761383 
 
 
-
 
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