Gene Sros_4085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4085 
Symbol 
ID8667379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4544083 
End bp4544781 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003339736 
Protein GI271965540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.750305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCCGC TCCTCCCCGC GAGCCTCCAC GGGCGGTGCG AGGGCGCCGC GCGCCGCTTC 
AGGGCATGGG ACTCCCTTGA GATCCGCGGG CCTTTCACCA GGGGAGGCCG GTGTTACGGT
GCGATCGTGA GCAGCACCGC ACCGCCCGGG CCCGGGGCTC GGGGCCGCAC GCGCCGCGCC
ATCCTGAGCG CGGCCGCCTC AGTGCTCGCC CGTGACCGCA CCGCGACGTT CGCGGACATC
GCCGAGGCCG CGGGTGTCGG CCGTACGACC CTGGACGGCT GTTTTCCCGA CCGCGAAGAG
CTCGTCAGAG CGGTCGTCGA AGACTCCCTG GAGGAGGTCG GCCGGTCGCT GAACGGGGCG
GCGCCCGACC AGGGCCCACC GCTGGAGGCG CTGCGCAGGC TCGTCGCGGC AATGGTGGAC
GTCGGCGACC GGCTGCGGTT CCTGTACGGC GATCCGCACC TCTCGCGGGG ATTCCACGCG
GCCGGCCGGC CGGTGATCGA CCTCGTCGAG CGGGGGCAGG CCGAGGGGGT GTTCGACCCG
GAGGTGGGCG CCGCCTGGAT CGAGCACGTG CTGTGGGCGC TGGTGTACAC CGGGTGCGAG
GAGGTCGCCA GGGGGAGGCG TCCGCGCCAC GACGTCACCT CTGCCGTGAT CCGCACGCTG
GAGAACGGCA TCCATCTCCA GGGAGCGCCC GCTCTCTAG
 
Protein sequence
MPPLLPASLH GRCEGAARRF RAWDSLEIRG PFTRGGRCYG AIVSSTAPPG PGARGRTRRA 
ILSAAASVLA RDRTATFADI AEAAGVGRTT LDGCFPDREE LVRAVVEDSL EEVGRSLNGA
APDQGPPLEA LRRLVAAMVD VGDRLRFLYG DPHLSRGFHA AGRPVIDLVE RGQAEGVFDP
EVGAAWIEHV LWALVYTGCE EVARGRRPRH DVTSAVIRTL ENGIHLQGAP AL