Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2430 |
Symbol | |
ID | 5870219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2720464 |
End bp | 2721021 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547553 |
Product | regulatory protein LacI |
Protein accession | YP_001668665 |
Protein GI | 167033434 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.633892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCA CTCCCCACGA TGAACGCCTG CTCAAGGCCC TGGCCCACGC CATCGTGGTC CACCCGCGCG CCACGCTCAA GGAACTGGCC GAGACCGCCG GCGTCAGCAA AGCTACCCTG CACCGCTTCT GCGGCACCCG CGACAACCTG GTGGCCATGC TCGAAAACCA CGGCGAGCAA GTGCTCAACC AGGTGATTGC AAATGCCGCC TTGCACACCG CTGCCCCCTT GGAAGCGGTG CGTCACCTGA TTGCCGAACA CCTCAAGCAC CGCGAAATGC TGGTGTTTCT GATGTTTCAG TACCGCCCCG ATACATTGCT CGGCGACAGT GAAGACCGCC GCTGGTTGAC CTATACCCGG GCGATGGATG CGTTTTTCCT GCGTGCGCAA CAGATGGGCG TGTTGCGCAT CGACATCAGC GCAGCGGTGT TTACCGAAGT GTTCATCACC CAGATCTACG CCATGGTCGA CGCCGAGCGG CGCGGGCGCG CAGCCAGTGC CAATTCGGCG CAGGCCTTGG AGCAATTGTT CCTGCAGGGG GCGCTGGCCA GGGGTTGA
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Protein sequence | MTPTPHDERL LKALAHAIVV HPRATLKELA ETAGVSKATL HRFCGTRDNL VAMLENHGEQ VLNQVIANAA LHTAAPLEAV RHLIAEHLKH REMLVFLMFQ YRPDTLLGDS EDRRWLTYTR AMDAFFLRAQ QMGVLRIDIS AAVFTEVFIT QIYAMVDAER RGRAASANSA QALEQLFLQG ALARG
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