19 homologs were found in PanDaTox collection
for query gene Mext_2719 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010172  Mext_2719  transcription activator effector binding  100 
 
 		 257 aa  506  9.999999999999999e-143  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_2946  transcription activator effector binding  98.44 
 
 		 298 aa  499  1e-140  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.433346  hitchhiker  0.00143394 
 
 
-
 
NC_010725  Mpop_2841  transcription activator effector binding  84.74 
 
 		 249 aa  426  1e-118  Methylobacterium populi BJ001  Bacteria  normal  0.491142  normal  0.203894 
 
 
-
 
NC_010505  Mrad2831_5334  transcription activator effector binding  57.8 
 
 		 255 aa  229  4e-59  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.313635  normal  1 
 
 
-
 
NC_011894  Mnod_0182  transcription activator effector binding  55.76 
 
 		 236 aa  212  4.9999999999999996e-54  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_3657  transcription activator effector binding  55.05 
 
 		 259 aa  210  2e-53  Methylobacterium sp. 4-46  Bacteria  normal  0.217912  hitchhiker  0.00540131 
 
 
-
 
NC_010581  Bind_3021  transcription activator effector binding  43.79 
 
 		 219 aa  138  1e-31  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_0216  transcription activator, effector binding  41.1 
 
 		 252 aa  125  7e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.05327  hitchhiker  0.00731322 
 
 
-
 
NC_011666  Msil_1851  transcription activator effector binding  42.5 
 
 		 241 aa  124  1e-27  Methylocella silvestris BL2  Bacteria  n/a    normal  0.493771 
 
 
-
 
NC_007778  RPB_0358  transcription activator, effector binding  40.41 
 
 		 243 aa  121  9e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.923721  normal  1 
 
 
-
 
NC_011004  Rpal_0250  transcription activator effector binding  40.14 
 
 		 260 aa  120  9.999999999999999e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.495724  n/a   
 
 
-
 
NC_007958  RPD_0513  transcription activator, effector binding  39.46 
 
 		 268 aa  119  6e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.482512  normal  1 
 
 
-
 
NC_009485  BBta_0371  hypothetical protein  39.46 
 
 		 240 aa  117  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.548098  normal  0.611025 
 
 
-
 
NC_009720  Xaut_0410  transcription activator effector binding  36.36 
 
 		 227 aa  108  6e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  0.122194  normal  0.857811 
 
 
-
 
NC_007964  Nham_3576  transcription activator, effector binding  34.69 
 
 		 242 aa  102  8e-21  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_2777  transcription activator, effector binding  34.69 
 
 		 242 aa  97.1  3e-19  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0772774  normal  1 
 
 
-
 
NC_008541  Arth_0754  transcription activator, effector binding  25.55 
 
 		 156 aa  45.8  0.0006  Arthrobacter sp. FB24  Bacteria  normal  0.287281  n/a   
 
 
-
 
NC_008752  Aave_4607  transcription activator, effector binding  21.32 
 
 		 156 aa  44.3  0.002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0684789  normal  1 
 
 
-
 
NC_007955  Mbur_1206  transcription activator, effector binding  27.43 
 
 		 132 aa  42  0.009  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
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