19 homologs were found in PanDaTox collection
for query gene M446_3657 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010511  M446_3657  transcription activator effector binding  100 
 
 		 259 aa  502  1e-141  Methylobacterium sp. 4-46  Bacteria  normal  0.217912  hitchhiker  0.00540131 
 
 
-
 
NC_011894  Mnod_0182  transcription activator effector binding  88.14 
 
 		 236 aa  367  1e-101  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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NC_010505  Mrad2831_5334  transcription activator effector binding  56.64 
 
 		 255 aa  232  4.0000000000000004e-60  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.313635  normal  1 
 
 
-
 
NC_011757  Mchl_2946  transcription activator effector binding  55.5 
 
 		 298 aa  221  9.999999999999999e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.433346  hitchhiker  0.00143394 
 
 
-
 
NC_010172  Mext_2719  transcription activator effector binding  55.05 
 
 		 257 aa  219  3e-56  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_2841  transcription activator effector binding  51.78 
 
 		 249 aa  210  2e-53  Methylobacterium populi BJ001  Bacteria  normal  0.491142  normal  0.203894 
 
 
-
 
NC_010581  Bind_3021  transcription activator effector binding  40.1 
 
 		 219 aa  153  2.9999999999999998e-36  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_0358  transcription activator, effector binding  45.27 
 
 		 243 aa  141  9.999999999999999e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.923721  normal  1 
 
 
-
 
NC_011666  Msil_1851  transcription activator effector binding  44.03 
 
 		 241 aa  140  1.9999999999999998e-32  Methylocella silvestris BL2  Bacteria  n/a    normal  0.493771 
 
 
-
 
NC_007958  RPD_0513  transcription activator, effector binding  41.3 
 
 		 268 aa  138  1e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.482512  normal  1 
 
 
-
 
NC_009485  BBta_0371  hypothetical protein  44.67 
 
 		 240 aa  135  7.000000000000001e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.548098  normal  0.611025 
 
 
-
 
NC_007925  RPC_0216  transcription activator, effector binding  42.95 
 
 		 252 aa  135  7.000000000000001e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.05327  hitchhiker  0.00731322 
 
 
-
 
NC_011004  Rpal_0250  transcription activator effector binding  44.3 
 
 		 260 aa  132  3.9999999999999996e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.495724  n/a   
 
 
-
 
NC_007964  Nham_3576  transcription activator, effector binding  39.04 
 
 		 242 aa  129  7.000000000000001e-29  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_2777  transcription activator, effector binding  37.5 
 
 		 242 aa  120  1.9999999999999998e-26  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0772774  normal  1 
 
 
-
 
NC_009720  Xaut_0410  transcription activator effector binding  30.82 
 
 		 227 aa  95.5  7e-19  Xanthobacter autotrophicus Py2  Bacteria  normal  0.122194  normal  0.857811 
 
 
-
 
NC_008752  Aave_4607  transcription activator, effector binding  26.43 
 
 		 156 aa  48.5  0.0001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0684789  normal  1 
 
 
-
 
NC_009953  Sare_4810  transcription activator effector binding  27.59 
 
 		 274 aa  44.3  0.002  Salinispora arenicola CNS-205  Bacteria  normal  0.858088  normal  1 
 
 
-
 
NC_011886  Achl_2087  transcription activator effector binding  27.94 
 
 		 166 aa  43.1  0.005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000102768 
 
 
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