| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0250 |
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| Symbol | |
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| ID | 6407894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 265918 |
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| End bp | 266700 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710158 |
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| Product | transcription activator effector binding |
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| Protein accession | YP_001989286 |
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| Protein GI | 192288681 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4978] Transcriptional regulator, effector-binding domain/component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.495724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACGCC CCTGCCTGTT TGGTCTTATG CGTGTCGGGC TGATGCCGGC GCTGGTGCTG
ACGCTCGGAA TCGTCGGCGC ATCGGCCCAG ACCGCCCCCT ATGCCAGCAA GGACGCCAAG
GACAAGCCGC CGGCCGCAGC ACCGGAGCAA GCTCAGACGC CGGCGGCGCC TGCCACGTCC
GCAACTCCGG CGGCCCCCGC CCCTGCCACG CCGCCGGCCG CGAGCGAAGC GCCGGCCGCG
ACGCCTGTTC CCACCACGCC GTCGGCTCCG TCAGCGACCC AGACCCCGGC GGCGCCGTCC
GCTCCCGCGC CGGTGCAGAC CGCCGATCCG TTCGGCGAAG AGAGCACGCT TGAGCCGAAG
ACGGTGGTGA TCCTGAAGGG CAAGGCGAAC TGGGACAACG CCTTCGACAG CCTGATGGAC
GCGTTCAAGT CGCTGACCGC GCTGCTCGAC AAGCAGGGCA TCGCGCCGAA CGGCAACCCG
ATGATCGTTT ACACCTCGAC CGACGACGCC GGCTTCACTT TCCAGGCGCA AATCCCGGTG
CCGCAGGAAC CGAAGAACCT CGGCAAGTCG ATGAGCATCG GCAAGTCGCC CGACGGCAAG
GCGCTAAAAT TCGTCCACCG CGGCTCCTAC GACAACATGG ACAACACCTA CGAGGCGATC
ACCAACTTCC TCGACGACAA GAAGCTCGAG GCCAAGGATA CCTTCATCGA GGAATACATG
ACCGACCCGC TGAAGACCGC CGAAGACAAG CTGGTGATCA ACGTTTACGT GCCGATGAAA
TGA
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| Protein sequence | MERPCLFGLM RVGLMPALVL TLGIVGASAQ TAPYASKDAK DKPPAAAPEQ AQTPAAPATS
ATPAAPAPAT PPAASEAPAA TPVPTTPSAP SATQTPAAPS APAPVQTADP FGEESTLEPK
TVVILKGKAN WDNAFDSLMD AFKSLTALLD KQGIAPNGNP MIVYTSTDDA GFTFQAQIPV
PQEPKNLGKS MSIGKSPDGK ALKFVHRGSY DNMDNTYEAI TNFLDDKKLE AKDTFIEEYM
TDPLKTAEDK LVINVYVPMK
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