More than 300 homologs were found in PanDaTox collection
for query gene Mext_1170 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_1330  acyl-CoA dehydrogenase domain protein  97.9 
 
 
381 aa  709    Methylobacterium chloromethanicum CM4  Bacteria  normal  0.135454  normal  0.523473 
 
 
-
 
NC_010172  Mext_1170  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
381 aa  752    Methylobacterium extorquens PA1  Bacteria  normal  0.665446  normal  0.0188326 
 
 
-
 
NC_010725  Mpop_4897  acyl-CoA dehydrogenase domain protein  82.37 
 
 
381 aa  590  1e-167  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4840  acyl-CoA dehydrogenase type 2  75.27 
 
 
381 aa  472  1e-132  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.910203 
 
 
-
 
NC_008688  Pden_5014  acyl-CoA dehydrogenase type 2  53.65 
 
 
384 aa  387  1e-106  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4462  Acyl-CoA dehydrogenase type 2 domain  53.42 
 
 
402 aa  366  1e-100  Ralstonia pickettii 12J  Bacteria  normal  normal  0.542965 
 
 
-
 
NC_010552  BamMC406_4154  acyl-CoA dehydrogenase domain-containing protein  52.48 
 
 
440 aa  365  1e-100  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.233252 
 
 
-
 
NC_012857  Rpic12D_4596  Acyl-CoA dehydrogenase type 2 domain protein  53.42 
 
 
402 aa  366  1e-100  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3681  acyl-CoA dehydrogenase domain-containing protein  51.96 
 
 
442 aa  360  3e-98  Burkholderia ambifaria AMMD  Bacteria  normal  0.902105  normal 
 
 
-
 
NC_010581  Bind_0523  acyl-CoA dehydrogenase type 2  53.07 
 
 
407 aa  357  1.9999999999999998e-97  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3873  Acyl-CoA dehydrogenase type 2 domain protein  52.66 
 
 
411 aa  354  1e-96  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  53.09 
 
 
384 aa  350  2e-95  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_007973  Rmet_2217  Acyl-CoA dehydrogenase  52.12 
 
 
402 aa  350  2e-95  Cupriavidus metallidurans CH34  Bacteria  normal  0.0777616  normal  0.101595 
 
 
-
 
NC_010515  Bcenmc03_3260  acyl-CoA dehydrogenase domain-containing protein  50.79 
 
 
459 aa  347  2e-94  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4333  acyl-CoA dehydrogenase type 2  51.76 
 
 
440 aa  346  5e-94  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.619225  normal  0.220534 
 
 
-
 
NC_009485  BBta_3307  putative acyl-CoA dehydrogenase  54.2 
 
 
394 aa  338  5.9999999999999996e-92  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2670  Acyl-CoA dehydrogenase type 2 domain protein  49.73 
 
 
389 aa  337  9.999999999999999e-92  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007348  Reut_B5046  Acyl-CoA dehydrogenase, C-terminal  52.62 
 
 
402 aa  338  9.999999999999999e-92  Ralstonia eutropha JMP134  Bacteria  normal  0.721222  n/a   
 
 
-
 
NC_007005  Psyr_3604  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.19 
 
 
393 aa  334  1e-90  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.339437 
 
 
-
 
NC_007511  Bcep18194_B1754  Acyl-CoA dehydrogenase  51.22 
 
 
454 aa  335  1e-90  Burkholderia sp. 383  Bacteria  normal  normal  0.0688656 
 
 
-
 
NC_008061  Bcen_4109  Acyl-CoA dehydrogenase, type 2-like  50.4 
 
 
452 aa  334  2e-90  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.381793  n/a   
 
 
-
 
NC_008543  Bcen2424_4257  acyl-CoA dehydrogenase type 2  50.4 
 
 
452 aa  334  2e-90  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00125865  normal  0.295507 
 
 
-
 
NC_010322  PputGB1_2538  acyl-CoA dehydrogenase type 2  50.95 
 
 
378 aa  332  5e-90  Pseudomonas putida GB-1  Bacteria  normal  0.844573  decreased coverage  0.00557828 
 
 
-
 
NC_010338  Caul_2659  acyl-CoA dehydrogenase type 2  52.03 
 
 
390 aa  331  1e-89  Caulobacter sp. K31  Bacteria  normal  normal  0.387509 
 
 
-
 
NC_009485  BBta_1981  putative acyl-CoA dehydrogenase  49.2 
 
 
388 aa  330  2e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2770  ccyl-CoA dehydrogenase type 2 domain protein  50 
 
 
406 aa  328  1.0000000000000001e-88  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.271017  normal 
 
 
-
 
NC_004578  PSPTO_1790  acyl-CoA dehydrogenase family protein  48.15 
 
 
397 aa  325  9e-88  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3226  acyl-CoA dehydrogenase-related protein  51.83 
 
 
380 aa  324  1e-87  Pseudomonas putida KT2440  Bacteria  normal  0.690171  normal 
 
 
-
 
NC_012560  Avin_31100  Acyl-CoA dehydrogenase family protein  48.27 
 
 
396 aa  311  2e-83  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_21570  Acyl-CoA dehydrogenase family protein  50.54 
 
 
400 aa  306  3e-82  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_30500  putative acyl-CoA dehydrogenase  49.35 
 
 
383 aa  301  1e-80  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1847  acyl-CoA dehydrogenase type 2  44.09 
 
 
382 aa  300  3e-80  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.25699  normal 
 
 
-
 
NC_009485  BBta_5139  putative acyl-CoA dehydrogenase  42.74 
 
 
399 aa  292  6e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0630041 
 
 
-
 
NC_009485  BBta_2584  putative acyl-CoA dehydrogenase  44.75 
 
 
398 aa  283  5.000000000000001e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0375347 
 
 
-
 
NC_009621  Smed_5653  acyl-CoA dehydrogenase type 2  42.86 
 
 
410 aa  280  4e-74  Sinorhizobium medicae WSM419  Bacteria  normal  0.329683  normal  0.865966 
 
 
-
 
NC_009921  Franean1_2020  acyl-CoA dehydrogenase type 2  42.63 
 
 
394 aa  265  1e-69  Frankia sp. EAN1pec  Bacteria  normal  0.692035  normal  0.294025 
 
 
-
 
NC_011981  Avi_7179  acyl-CoA dehydrogenase  40.86 
 
 
394 aa  257  3e-67  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3756  acyl-CoA dehydrogenase type 2  41.87 
 
 
418 aa  235  9e-61  Frankia sp. EAN1pec  Bacteria  normal  0.326681  normal 
 
 
-
 
NC_011988  Avi_5178  acyl-CoA dehydrogenase-related protein  40.59 
 
 
393 aa  234  2.0000000000000002e-60  Agrobacterium vitis S4  Bacteria  normal  0.897204  n/a   
 
 
-
 
NC_013093  Amir_4313  acyl-CoA dehydrogenase type 2 domain protein  42.36 
 
 
397 aa  230  4e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  35.93 
 
 
390 aa  218  1e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007777  Francci3_2419  Acyl-CoA dehydrogenase  42.81 
 
 
332 aa  217  2.9999999999999998e-55  Frankia sp. CcI3  Bacteria  normal  0.238624  normal  0.291589 
 
 
-
 
NC_009523  RoseRS_0478  acyl-CoA dehydrogenase domain-containing protein  36.41 
 
 
396 aa  194  3e-48  Roseiflexus sp. RS-1  Bacteria  normal  0.859047  normal 
 
 
-
 
NC_009767  Rcas_0150  acyl-CoA dehydrogenase domain-containing protein  35 
 
 
394 aa  188  1e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1231  Acyl-CoA dehydrogenase, type 2-like protein  41.03 
 
 
384 aa  175  9.999999999999999e-43  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.279686  normal 
 
 
-
 
NC_013205  Aaci_0955  Acyl-CoA dehydrogenase type 2 domain protein  35.04 
 
 
398 aa  171  2e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  34.43 
 
 
392 aa  163  5.0000000000000005e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_2881  acyl-CoA dehydrogenase type 2  28.69 
 
 
382 aa  154  2.9999999999999998e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.255861  n/a   
 
 
-
 
NC_009674  Bcer98_2066  acyl-CoA dehydrogenase type 2  30.48 
 
 
384 aa  152  1e-35  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.335702  n/a   
 
 
-
 
NC_002976  SERP1866  acyl-CoA dehydrogenase-related protein  29.06 
 
 
381 aa  148  2.0000000000000003e-34  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1626  Acyl-CoA dehydrogenase type 2 domain protein  32.71 
 
 
387 aa  148  2.0000000000000003e-34  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2142  putative acyl-CoA dehydrogenase, short-chain specific  28.18 
 
 
382 aa  146  6e-34  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS2889  acyl-CoA dehydrogenase, short-chain specific  28.26 
 
 
382 aa  145  1e-33  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00742766  n/a   
 
 
-
 
NC_006274  BCZK2818  acyl-CoA dehydrogenase, short-chain specific  28.26 
 
 
382 aa  145  1e-33  Bacillus cereus E33L  Bacteria  normal  0.149479  n/a   
 
 
-
 
NC_007530  GBAA_3105  acyl-CoA dehydrogenase, short-chain specific  28.26 
 
 
382 aa  145  1e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.362062  n/a   
 
 
-
 
NC_009632  SaurJH1_2352  acyl-CoA dehydrogenase type 2  28.73 
 
 
384 aa  145  1e-33  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.657423  n/a   
 
 
-
 
NC_009487  SaurJH9_2310  acyl-CoA dehydrogenase type 2  28.73 
 
 
384 aa  145  1e-33  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.154104  n/a   
 
 
-
 
NC_011658  BCAH187_A3128  putative acyl-CoA dehydrogenase, short-chain specific  28.26 
 
 
382 aa  144  2e-33  Bacillus cereus AH187  Bacteria  hitchhiker  0.000407188  n/a   
 
 
-
 
NC_011773  BCAH820_3109  putative acyl-CoA dehydrogenase, short-chain specific  28.26 
 
 
382 aa  144  3e-33  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A3094  putative acyl-CoA dehydrogenase, short-chain specific  28.26 
 
 
382 aa  144  3e-33  Bacillus cereus B4264  Bacteria  normal  0.952201  n/a   
 
 
-
 
NC_005957  BT9727_2857  acyl-CoA dehydrogenase, short-chain specific  28.26 
 
 
382 aa  144  3e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.25076  n/a   
 
 
-
 
NC_003909  BCE_3126  acyl-CoA dehydrogenase, short-chain specific, putative  27.87 
 
 
382 aa  142  7e-33  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00757934  n/a   
 
 
-
 
NC_009972  Haur_2304  acyl-CoA dehydrogenase type 2  33.69 
 
 
392 aa  141  1.9999999999999998e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0799931  n/a   
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  30.56 
 
 
382 aa  110  4.0000000000000004e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  27.56 
 
 
380 aa  106  5e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  28.01 
 
 
377 aa  104  2e-21  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  26.32 
 
 
380 aa  103  5e-21  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1173  Acyl-CoA dehydrogenase type 2 domain protein  27.78 
 
 
383 aa  103  7e-21  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  28.11 
 
 
394 aa  102  1e-20  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  32.9 
 
 
387 aa  102  1e-20  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  32 
 
 
387 aa  102  2e-20  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_010002  Daci_1775  acyl-CoA dehydrogenase type 2  30.73 
 
 
436 aa  102  2e-20  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  27.85 
 
 
375 aa  101  2e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  27.89 
 
 
380 aa  101  2e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_20400  acyl-CoA dehydrogenase  31.22 
 
 
396 aa  100  4e-20  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.170444  normal 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  28.39 
 
 
375 aa  99.4  8e-20  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  25.39 
 
 
377 aa  99  1e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_007777  Francci3_2247  butyryl-CoA dehydrogenase  28.5 
 
 
383 aa  99.4  1e-19  Frankia sp. CcI3  Bacteria  normal  0.176219  normal  0.0167147 
 
 
-
 
NC_008254  Meso_2091  Acyl-CoA dehydrogenase, type 2-like  28.22 
 
 
389 aa  99  1e-19  Chelativorans sp. BNC1  Bacteria  normal  0.424709  n/a   
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  27.03 
 
 
375 aa  97.4  4e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  28.98 
 
 
386 aa  96.3  7e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  27.6 
 
 
378 aa  96.3  7e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_009439  Pmen_2037  acyl-CoA dehydrogenase domain-containing protein  27.18 
 
 
375 aa  96.3  7e-19  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.666233 
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  24.17 
 
 
382 aa  96.3  8e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2082  acyl-CoA dehydrogenase domain protein  28.53 
 
 
376 aa  95.9  1e-18  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  27.37 
 
 
375 aa  95.1  2e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  27.58 
 
 
386 aa  94.4  3e-18  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1771  acyl-CoA dehydrogenase domain-containing protein  27.65 
 
 
385 aa  94  4e-18  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.426084  normal  0.166679 
 
 
-
 
NC_007952  Bxe_B1567  putative acyl-CoA dehydrogenase  27.52 
 
 
405 aa  94  4e-18  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6338  acyl-CoA dehydrogenase type 2  27.49 
 
 
412 aa  93.6  5e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_6515  Acyl-CoA dehydrogenase, type 2-like  27.76 
 
 
412 aa  93.6  5e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6749  acyl-CoA dehydrogenase type 2  27.76 
 
 
412 aa  93.6  5e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.144379 
 
 
-
 
NC_013093  Amir_1570  acyl-CoA dehydrogenase domain protein  28 
 
 
383 aa  93.2  6e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1842  acyl-CoA dehydrogenase domain-containing protein  29.3 
 
 
387 aa  93.2  6e-18  Sphingomonas wittichii RW1  Bacteria  normal  0.982054  normal 
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  28.91 
 
 
375 aa  92.8  9e-18  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  28.5 
 
 
375 aa  92.8  9e-18  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_009921  Franean1_4395  acyl-CoA dehydrogenase type 2  30.48 
 
 
434 aa  92.4  1e-17  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0137  hypothetical protein  26.16 
 
 
405 aa  92  1e-17  Burkholderia xenovorans LB400  Bacteria  normal  0.209836  normal 
 
 
-
 
NC_009921  Franean1_4050  acyl-CoA dehydrogenase domain-containing protein  29.67 
 
 
383 aa  92.4  1e-17  Frankia sp. EAN1pec  Bacteria  normal  0.795074  normal  0.300284 
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  26.8 
 
 
383 aa  92  1e-17  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
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