More than 300 homologs were found in PanDaTox collection
for query gene Gbem_3575 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007517  Gmet_3306  Acyl-CoA dehydrogenase-like  85.75 
 
 
380 aa  671    Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3575  acyl-CoA dehydrogenase domain protein  100 
 
 
380 aa  778    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0876  acyl-CoA dehydrogenase domain-containing protein  47.87 
 
 
387 aa  353  2.9999999999999997e-96  Salinispora arenicola CNS-205  Bacteria  normal  0.189497  normal  0.119821 
 
 
-
 
NC_009380  Strop_0934  acyl-CoA dehydrogenase domain-containing protein  47.07 
 
 
387 aa  353  4e-96  Salinispora tropica CNB-440  Bacteria  normal  normal  0.496704 
 
 
-
 
NC_013131  Caci_4530  acyl-CoA dehydrogenase domain protein  47.87 
 
 
389 aa  349  5e-95  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.335652  normal  0.412983 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  51.32 
 
 
379 aa  348  1e-94  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  50.79 
 
 
380 aa  345  1e-93  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_6030  acyl-CoA dehydrogenase domain-containing protein  46.54 
 
 
391 aa  342  9e-93  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1697  acyl-CoA dehydrogenase domain protein  50.27 
 
 
386 aa  341  1e-92  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0868604  normal 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  50.39 
 
 
379 aa  340  2e-92  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  48.67 
 
 
376 aa  340  2e-92  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  48.67 
 
 
376 aa  340  2e-92  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  48.67 
 
 
381 aa  341  2e-92  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  50.39 
 
 
379 aa  340  2e-92  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  48.67 
 
 
376 aa  340  2e-92  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  48.67 
 
 
376 aa  340  2e-92  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  48.67 
 
 
376 aa  340  2.9999999999999998e-92  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  46.13 
 
 
381 aa  340  2.9999999999999998e-92  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  48.94 
 
 
376 aa  340  2.9999999999999998e-92  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  48.4 
 
 
376 aa  339  4e-92  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  50.39 
 
 
379 aa  339  4e-92  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  49.87 
 
 
379 aa  339  4e-92  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  47.21 
 
 
379 aa  339  5e-92  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_013739  Cwoe_4700  acyl-CoA dehydrogenase domain protein  49.07 
 
 
384 aa  339  5e-92  Conexibacter woesei DSM 14684  Bacteria  normal  0.201387  normal  0.86731 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  48.4 
 
 
381 aa  339  5e-92  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  49.87 
 
 
379 aa  339  5e-92  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  48.14 
 
 
381 aa  338  9.999999999999999e-92  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  50.13 
 
 
379 aa  337  1.9999999999999998e-91  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  50.13 
 
 
379 aa  337  1.9999999999999998e-91  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  50.13 
 
 
379 aa  337  1.9999999999999998e-91  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  50.13 
 
 
379 aa  337  2.9999999999999997e-91  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  48.4 
 
 
376 aa  336  2.9999999999999997e-91  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  46.81 
 
 
387 aa  334  1e-90  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  49.34 
 
 
379 aa  333  2e-90  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1058  acyl-CoA dehydrogenase domain protein  45.74 
 
 
386 aa  330  2e-89  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.405365  n/a   
 
 
-
 
NC_013510  Tcur_4115  acyl-CoA dehydrogenase domain protein  45.91 
 
 
390 aa  327  2.0000000000000001e-88  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2589  acyl-CoA dehydrogenase domain protein  45.91 
 
 
390 aa  327  2.0000000000000001e-88  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000683478  n/a   
 
 
-
 
NC_007333  Tfu_1647  acyl-CoA dehydrogenase  45.74 
 
 
385 aa  327  2.0000000000000001e-88  Thermobifida fusca YX  Bacteria  normal  0.658516  n/a   
 
 
-
 
NC_013235  Namu_4214  acyl-CoA dehydrogenase domain protein  44.8 
 
 
386 aa  327  2.0000000000000001e-88  Nakamurella multipartita DSM 44233  Bacteria  normal  0.234142  normal  0.067843 
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  47.76 
 
 
379 aa  327  3e-88  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_013757  Gobs_4353  acyl-CoA dehydrogenase domain protein  46.13 
 
 
385 aa  324  1e-87  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0409  acyl-CoA dehydrogenase domain-containing protein  45.87 
 
 
406 aa  324  2e-87  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0714  acyl-CoA dehydrogenase domain-containing protein  48.28 
 
 
388 aa  323  3e-87  Thermobispora bispora DSM 43833  Bacteria  normal  0.114203  normal  0.0860013 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  46.03 
 
 
380 aa  323  3e-87  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1390  acyl-CoA dehydrogenase domain-containing protein  45.65 
 
 
390 aa  323  3e-87  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6366  acyl-CoA dehydrogenase domain protein  45.5 
 
 
387 aa  322  6e-87  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1659  acyl-CoA dehydrogenase domain protein  47.07 
 
 
390 aa  322  8e-87  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.487392 
 
 
-
 
NC_009338  Mflv_4743  butyryl-CoA dehydrogenase  45.74 
 
 
417 aa  321  9.999999999999999e-87  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  45.48 
 
 
389 aa  320  1.9999999999999998e-86  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  48.16 
 
 
379 aa  321  1.9999999999999998e-86  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4062  acyl-CoA dehydrogenase domain-containing protein  45.38 
 
 
389 aa  320  1.9999999999999998e-86  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1526  acyl-CoA dehydrogenase domain protein  45.5 
 
 
404 aa  319  3.9999999999999996e-86  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.84855  n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  47.87 
 
 
389 aa  319  6e-86  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4413  acyl-CoA dehydrogenase domain protein  44.68 
 
 
384 aa  316  3e-85  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  45.28 
 
 
379 aa  317  3e-85  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13303  acyl-CoA dehydrogenase fadE25  45.21 
 
 
389 aa  316  3e-85  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3576  acyl-CoA dehydrogenase domain protein  46.13 
 
 
380 aa  317  3e-85  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  44.83 
 
 
379 aa  314  1.9999999999999998e-84  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1782  butyryl-CoA dehydrogenase  47.21 
 
 
379 aa  313  2.9999999999999996e-84  Desulfotomaculum reducens MI-1  Bacteria  normal  0.257154  n/a   
 
 
-
 
NC_013132  Cpin_6291  acyl-CoA dehydrogenase domain protein  44.03 
 
 
379 aa  313  3.9999999999999997e-84  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  45.41 
 
 
382 aa  313  3.9999999999999997e-84  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1549  butyryl-CoA dehydrogenase  44.21 
 
 
387 aa  312  6.999999999999999e-84  Frankia sp. CcI3  Bacteria  normal  0.431805  normal 
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  44.56 
 
 
379 aa  311  1e-83  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  44.56 
 
 
379 aa  311  1e-83  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1490  butyryl-CoA dehydrogenase  46.4 
 
 
378 aa  310  2e-83  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  46.15 
 
 
380 aa  310  2e-83  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  42.67 
 
 
379 aa  309  4e-83  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  43.92 
 
 
381 aa  309  4e-83  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_28760  acyl-CoA dehydrogenase  44.47 
 
 
382 aa  308  9e-83  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.12851  normal  0.0971486 
 
 
-
 
NC_009077  Mjls_1336  acyl-CoA dehydrogenase domain-containing protein  45.07 
 
 
388 aa  308  1.0000000000000001e-82  Mycobacterium sp. JLS  Bacteria  normal  0.11867  normal 
 
 
-
 
NC_008705  Mkms_1317  acyl-CoA dehydrogenase domain-containing protein  45.07 
 
 
388 aa  308  1.0000000000000001e-82  Mycobacterium sp. KMS  Bacteria  normal  normal  0.247959 
 
 
-
 
NC_008146  Mmcs_1300  acyl-CoA dehydrogenase-like protein  45.07 
 
 
388 aa  308  1.0000000000000001e-82  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1345  acyl-CoA dehydrogenase, C-terminal domain protein  46.05 
 
 
387 aa  307  3e-82  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_08440  acyl-CoA dehydrogenase  45.95 
 
 
389 aa  306  4.0000000000000004e-82  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.231358  normal  0.194083 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  41.38 
 
 
379 aa  304  1.0000000000000001e-81  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  41.64 
 
 
379 aa  305  1.0000000000000001e-81  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009616  Tmel_0656  acyl-CoA dehydrogenase domain-containing protein  43.77 
 
 
380 aa  304  2.0000000000000002e-81  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  41.64 
 
 
402 aa  303  3.0000000000000004e-81  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_007517  Gmet_3307  Acyl-CoA dehydrogenase-like  43.8 
 
 
380 aa  303  5.000000000000001e-81  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2188  acyl-CoA dehydrogenase domain-containing protein  44.18 
 
 
387 aa  301  1e-80  Frankia sp. EAN1pec  Bacteria  normal  normal  0.130468 
 
 
-
 
NC_013171  Apre_0081  acyl-CoA dehydrogenase domain protein  43.47 
 
 
642 aa  297  3e-79  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3827  bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)  43.62 
 
 
379 aa  296  3e-79  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  42.71 
 
 
379 aa  295  7e-79  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3365  acyl-CoA dehydrogenase domain protein  43.62 
 
 
381 aa  295  1e-78  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.122497 
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  39.79 
 
 
379 aa  294  2e-78  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1371  butyryl-CoA dehydrogenase  43.58 
 
 
389 aa  292  5e-78  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.183303  normal 
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  42.44 
 
 
379 aa  292  6e-78  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  42.37 
 
 
390 aa  291  1e-77  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  42.63 
 
 
400 aa  290  3e-77  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_013730  Slin_5641  Butyryl-CoA dehydrogenase  41.95 
 
 
379 aa  288  9e-77  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  43.62 
 
 
381 aa  287  2.9999999999999996e-76  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  41.64 
 
 
388 aa  286  2.9999999999999996e-76  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  41.11 
 
 
380 aa  286  5e-76  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3451  acyl-CoA dehydrogenase domain protein  45.62 
 
 
377 aa  286  5e-76  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  41.38 
 
 
380 aa  285  5.999999999999999e-76  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_012857  Rpic12D_4086  acyl-CoA dehydrogenase domain protein  40.59 
 
 
377 aa  285  9e-76  Ralstonia pickettii 12D  Bacteria  normal  0.303595  normal  0.349393 
 
 
-
 
NC_010678  Rpic_3973  acyl-CoA dehydrogenase domain protein  40.59 
 
 
377 aa  285  9e-76  Ralstonia pickettii 12J  Bacteria  normal  0.78306  normal  0.788161 
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  42.37 
 
 
379 aa  285  1.0000000000000001e-75  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_008261  CPF_0092  butyryl-CoA dehydrogenase  41.49 
 
 
378 aa  283  2.0000000000000002e-75  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_06620  butyryl-CoA dehydrogenase  41.05 
 
 
380 aa  283  3.0000000000000004e-75  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
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