| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1390 |
|---|
| Symbol | |
|---|
| ID | 4595863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1466184 |
|---|
| End bp | 1467356 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639775988 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_922591 |
|---|
| Protein GI | 119715626 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCCG AGTTCCCTCT CTTCGCCCTC TCCGAGGAGC ACCAGGCCGT CCGCGAGGCG
GCCCGAGCCG TGTGCGACGC GAAGGTCGCA CCGTTCGCCG CCGACGTCGA CGAGCACGCC
CGCTACCCGC GGGAGGCGGC CGAGGCCCTG CTGGCTGCGG ACTTCCACGC CCCGCACATC
CCGGAGCAGT ACGGCGGTGC CGGCGCCGAC GCGCTCGCCA CCGTGATCAT CATCGAGGAG
GTCGCCCGGG CCTGTGCCTC GAGCAGCCTG ATCCCGGCGG TGAACAAGCT GGGGTCGCTG
CCGATCCAGC TGGCCGGCTC GGAGGAGCTG AAGGCGAAGT ACCTGGGTGC GCTGGCGCGC
GGTGAGGGCG GGTTCTCCTA CTGCCTCTCC GAGCCGGACG CGGGCTCGGA CGCGGTGGGG
ATGAAGGCCC GAGCCGTGCG CGACGGGGAC ACCTGGGTGC TCAACGGCGT GAAGCGCTGG
ATCACCAACG CGGGCGAGTC GGAGTACTAC ACGGTGATGG CGGTGACGGA CCCCGAGAAG
CGCTCCCGGG GGATCAGCGC GTTCGTGGTG GAGAAGAGCG ACGAGGGCGT CTCCTTCGGT
GCCCCGGAGA AGAAGCTCGG CATCAAGGGC TCTCCGACCC GGGAGGTCTA CCTGGACAAC
GTCCGCATCG GTGCGGACCG GATGATCGGG GCGGAGGGCG GCGGGTTCGA GATCGCGATG
CGCACCCTGG ACCACACCCG GGTCACGATC GCGGCGCAGG CCGTCGGCAT CGCCCAGGGG
GCGTTGGACT ACGCGCTGGG CTACGCCCAG GAGCGCAAGC AGTTCGGGAA GCCGATCAGC
GACTTCCAGG GCCTGCAGTT CCTGCTGGCC GACATGGGGA TGAAGGTCGA GGCCGCGCGC
CAGCTGACCT ACGCGGCGGC CGGGAAGTCC GAGCGGGGCG ACAGCGACCT GACGTTCTTC
GGGGCTGCGG CGAAGTGCTT CGCCTCCGAC GTCGCCATGG AGGTCACCAC CAACGCCGTC
CAGGTCCTCG GCGGGTACGG CTACACCCGG GACTACCCGG TCGAGCGGAT GATGCGGGAC
GCGAAGATCA CCCAGATCTA CGAGGGCACC AACCAGGTGC AGCGGATCGT GATGGCCCGC
CAGCTCCTCG CCGGCGTCCA GTCCCAGCTC TGA
|
|---|
| Protein sequence | MSSEFPLFAL SEEHQAVREA ARAVCDAKVA PFAADVDEHA RYPREAAEAL LAADFHAPHI
PEQYGGAGAD ALATVIIIEE VARACASSSL IPAVNKLGSL PIQLAGSEEL KAKYLGALAR
GEGGFSYCLS EPDAGSDAVG MKARAVRDGD TWVLNGVKRW ITNAGESEYY TVMAVTDPEK
RSRGISAFVV EKSDEGVSFG APEKKLGIKG SPTREVYLDN VRIGADRMIG AEGGGFEIAM
RTLDHTRVTI AAQAVGIAQG ALDYALGYAQ ERKQFGKPIS DFQGLQFLLA DMGMKVEAAR
QLTYAAAGKS ERGDSDLTFF GAAAKCFASD VAMEVTTNAV QVLGGYGYTR DYPVERMMRD
AKITQIYEGT NQVQRIVMAR QLLAGVQSQL
|
|---|
| |