12 homologs were found in PanDaTox collection
for query gene Cthe_1940 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009012  Cthe_1940  RDD domain-containing protein  100 
 
 		 246 aa  491  9.999999999999999e-139  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000546955  n/a   
 
 
-
 
NC_010644  Emin_0170  RDD domain-containing protein  28.75 
 
 		 145 aa  53.1  0.000004  Elusimicrobium minutum Pei191  Bacteria  decreased coverage  0.00000000534855  decreased coverage  0.00967799 
 
 
-
 
NC_011365  Gdia_1223  RDD domain containing protein  27.17 
 
 		 202 aa  49.3  0.00005  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007520  Tcr_1706  RDD  29.49 
 
 		 170 aa  47.4  0.0002  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.305495  n/a   
 
 
-
 
NC_004578  PSPTO_4317  hypothetical protein  29.91 
 
 		 235 aa  43.9  0.002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.409014  n/a   
 
 
-
 
NC_013739  Cwoe_1499  RDD domain containing protein  25 
 
 		 174 aa  43.5  0.003  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.127102 
 
 
-
 
NC_007912  Sde_3024  branched-chain amino acid aminotransferase I  33.33 
 
 		 167 aa  43.1  0.004  Saccharophagus degradans 2-40  Bacteria  normal  1  hitchhiker  0.000160975 
 
 
-
 
NC_008599  CFF8240_1260  RDD protein  28.95 
 
 		 151 aa  43.1  0.004  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_3583  MJ0042 family finger-like protein  26.53 
 
 		 295 aa  42.7  0.005  Geobacter lovleyi SZ  Bacteria  normal  0.040814  n/a   
 
 
-
 
NC_007005  Psyr_4021  RDD  27.59 
 
 		 241 aa  42.7  0.006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.897049  normal  0.0584976 
 
 
-
 
NC_008340  Mlg_0075  RDD domain-containing protein  24.84 
 
 		 185 aa  42  0.008  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0306278  normal  1 
 
 
-
 
NC_012560  Avin_38330  hypothetical protein  25.19 
 
 		 242 aa  42  0.009  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
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