| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4021 |
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| Symbol | |
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| ID | 3369557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4788758 |
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| End bp | 4789483 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637654379 |
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| Product | RDD |
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| Protein accession | YP_237089 |
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| Protein GI | 66047248 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1714] Predicted membrane protein/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.897049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0584976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATCCC GTCCCGCTTC GCCAAGGAAT GCAGCGCTGC CCACGCCGTT GGACACGCGC
ATTGAAATCG AGACGCCAGA AGGCATCGAT ATGCTTCTGC GCCCTGCCGG GCTGGTTTCC
CGCGCACTGG CGTTCGGCAT CGACTTCGCC ATTCGCGCAG CCCTCGTCGG CCTGTTCTTT
GTGCTTCTGC AGTTACTCGA CAAGCTCGGC ATGGGTCTGG CCGCTCTGGT GTTCTTTCTG
GTGAACTGGT GGTACATGGT GCTGTTTGAA GTGCTCAACC AGGGACGCAC ACCCGGAAAG
CGCCTGCTCG GGCTGCGGGT GGTGCACGAC GACGGCACGC CCATCGACTG GTCTTCGTCG
CTGATCCGTA ACCTGCTGCG CTTCGTCGAC ATGCTCCCGC TGGGCTACGG GCTGGGGGCG
ATTACTTGTC TGAACCACCC GTTCTTCAAA CGGCTGGGCG ATCTTGCAGC GGGAACGCTG
GTGATTTACA GCGACCGGCC GGTAGCGCGC CCTACCCTGC CGCAGGCCGA TCCGGTCATC
GTGCCTTTTG CCCTGCATCT GGATGAACAG CGGGCGGTGC TCGGCCTGGC GGAACGGCAG
GCTGAACTGT CCAGCGCGCG AACCCAGGAA CTCGCGGCCA TCCTTGCCGA ACCCTTGCGT
GTCTCCGCCG ACACGGCGGT CGCTCATGTA AACGGCATCG CCCGCAACCT GCTGGGGCCT
ACATGA
|
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| Protein sequence | MSSRPASPRN AALPTPLDTR IEIETPEGID MLLRPAGLVS RALAFGIDFA IRAALVGLFF
VLLQLLDKLG MGLAALVFFL VNWWYMVLFE VLNQGRTPGK RLLGLRVVHD DGTPIDWSSS
LIRNLLRFVD MLPLGYGLGA ITCLNHPFFK RLGDLAAGTL VIYSDRPVAR PTLPQADPVI
VPFALHLDEQ RAVLGLAERQ AELSSARTQE LAAILAEPLR VSADTAVAHV NGIARNLLGP
T
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