Gene Tcr_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1706 
Symbol 
ID3761004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1867473 
End bp1867985 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content44% 
IMG OID637786443 
ProductRDD 
Protein accessionYP_391972 
Protein GI78486047 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.305495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAATA AAACACCTGC TTCGGAAGAA GTAATCATCG AGAAAGTATC TGAAAATTCA 
CCGGATGTGA CACAGGTTGC CACGGACACG CCTTATGCCG GTTTTTGGAA ACGAGCCATT 
GCCTACTTAA TTGATGCGAT TTTGTTAACG TTTGTATTGG TGTTGCTGGG ATTTGTGTTT 
GCGATGTTTG GCGTGGTGGA TTTTAATGCC GAAGGGGAAA TGGTTCAGAA TGCGAACTTG 
ATGGATTTAG TGTCCATTTT TGTCAGCTGG GCGTATTTTG CTTTCATGGA GTCGTCCAGT 
AAGCAGGCGA CGTTCGGGAA AATGGCGTTG GGTATCCAAG TGACCGATTA TGCCGATCAG 
CGTATTTCAT TAGTGCGTGC GACCGTGCGA TTTTTCTCAA AATACCTTTC GGCCATTTTG 
TTGTTGATCG GGTTTATCAT GATTGCTTTC ACCGCTCGTA AACAAGGGTT GCACGATTTT 
ATTGCCAGTA CGTTGGTGGT CAACAAGTCT TAA
 
Protein sequence
MDNKTPASEE VIIEKVSENS PDVTQVATDT PYAGFWKRAI AYLIDAILLT FVLVLLGFVF 
AMFGVVDFNA EGEMVQNANL MDLVSIFVSW AYFAFMESSS KQATFGKMAL GIQVTDYADQ 
RISLVRATVR FFSKYLSAIL LLIGFIMIAF TARKQGLHDF IASTLVVNKS