22 homologs were found in PanDaTox collection
for query gene Clim_1480 on replicon NC_010803
Organism: Chlorobium limicola DSM 245



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010803  Clim_1480  transcriptional regulator, XRE family  100 
 
 		 134 aa  270  3e-72  Chlorobium limicola DSM 245  Bacteria  normal  0.204155  n/a   
 
 
-
 
NC_007514  Cag_1798  XRE family transcriptional regulator  74.42 
 
 		 135 aa  142  1e-33  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.853866  n/a   
 
 
-
 
NC_007512  Plut_1808  XRE family transcriptional regulator  52.48 
 
 		 135 aa  114  3.9999999999999997e-25  Chlorobium luteolum DSM 273  Bacteria  normal  0.0459623  normal  0.163421 
 
 
-
 
NC_011060  Ppha_2712  transcriptional regulator, XRE family  57.32 
 
 		 134 aa  113  7.999999999999999e-25  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_1519  transcriptional regulator, XRE family  45.33 
 
 		 97 aa  61.2  0.000000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.37865  normal  0.680818 
 
 
-
 
NC_013730  Slin_4822  XRE family plasmid maintenance system antidote protein  46.27 
 
 		 90 aa  57.8  0.00000004  Spirosoma linguale DSM 74  Bacteria  normal  0.246959  normal  0.144196 
 
 
-
 
NC_013132  Cpin_4943  transcriptional regulator, XRE family  44.44 
 
 		 82 aa  48.1  0.00004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.358741  normal  0.505342 
 
 
-
 
NC_013385  Adeg_1668  transcriptional regulator, XRE family  29.51 
 
 		 256 aa  48.1  0.00004  Ammonifex degensii KC4  Bacteria  hitchhiker  0.0000000231765  n/a   
 
 
-
 
NC_010831  Cphamn1_2419  XRE family plasmid maintenance system antidote protein  35.29 
 
 		 157 aa  47.8  0.00005  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011060  Ppha_1851  transcriptional regulator, XRE family  42.37 
 
 		 160 aa  46.2  0.0001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_3593  XRE family transcriptional regulator  37.29 
 
 		 76 aa  45.4  0.0003  Pseudomonas putida W619  Bacteria  normal  0.283454  normal  1 
 
 
-
 
NC_007951  Bxe_A2410  XRE family transcriptional regulator  33.78 
 
 		 88 aa  45.1  0.0003  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000194776  normal  0.242768 
 
 
-
 
NC_006368  lpp0074  hypothetical protein  41.94 
 
 		 94 aa  44.3  0.0006  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013037  Dfer_0351  XRE family plasmid maintenance system antidote protein  31.25 
 
 		 111 aa  43.9  0.0008  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.598178  normal  0.107212 
 
 
-
 
NC_008639  Cpha266_0938  helix-turn-helix domain-containing protein  37.14 
 
 		 155 aa  43.5  0.001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1358  helix-turn-helix domain-containing protein  30.43 
 
 		 94 aa  41.2  0.005  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_0471  XRE family plasmid maintenance system antidote protein  37.5 
 
 		 72 aa  40.8  0.006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000142015  n/a   
 
 
-
 
NC_008554  Sfum_0490  Fis family transcriptional regulator  32.94 
 
 		 176 aa  40.8  0.007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.100624 
 
 
-
 
NC_002936  DET1555  DNA-binding protein  35.59 
 
 		 72 aa  40.4  0.008  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.00000236293  n/a   
 
 
-
 
NC_007644  Moth_1627  XRE family transcriptional regulator  35.09 
 
 		 300 aa  40.4  0.009  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.0000000000332957  normal  1 
 
 
-
 
NC_009656  PSPA7_3725  DNA-binding protein  36.11 
 
 		 258 aa  40  0.01  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_67  hypothetical protein  35.59 
 
 		 72 aa  40  0.01  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
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