15 homologs were found in PanDaTox collection
for query gene Cpin_4943 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_4943  transcriptional regulator, XRE family  100 
 
 		 82 aa  168  3e-41  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.358741  normal  0.505342 
 
 
-
 
NC_013037  Dfer_1519  transcriptional regulator, XRE family  49.37 
 
 		 97 aa  76.3  0.0000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.37865  normal  0.680818 
 
 
-
 
NC_013730  Slin_4822  XRE family plasmid maintenance system antidote protein  61.02 
 
 		 90 aa  72  0.000000000002  Spirosoma linguale DSM 74  Bacteria  normal  0.246959  normal  0.144196 
 
 
-
 
NC_007512  Plut_1808  XRE family transcriptional regulator  46 
 
 		 135 aa  48.5  0.00003  Chlorobium luteolum DSM 273  Bacteria  normal  0.0459623  normal  0.163421 
 
 
-
 
NC_010803  Clim_1480  transcriptional regulator, XRE family  44.44 
 
 		 134 aa  48.1  0.00004  Chlorobium limicola DSM 245  Bacteria  normal  0.204155  n/a   
 
 
-
 
NC_013730  Slin_5326  transcriptional regulator, XRE family  47.73 
 
 		 68 aa  47.4  0.00007  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.134062 
 
 
-
 
NC_010831  Cphamn1_2419  XRE family plasmid maintenance system antidote protein  43.48 
 
 		 157 aa  44.3  0.0005  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007514  Cag_1798  XRE family transcriptional regulator  42 
 
 		 135 aa  43.9  0.0007  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.853866  n/a   
 
 
-
 
NC_011060  Ppha_2712  transcriptional regulator, XRE family  42.59 
 
 		 134 aa  43.9  0.0007  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011060  Ppha_1851  transcriptional regulator, XRE family  36.71 
 
 		 160 aa  43.1  0.001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_0351  XRE family plasmid maintenance system antidote protein  41.3 
 
 		 111 aa  40.8  0.006  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.598178  normal  0.107212 
 
 
-
 
NC_013223  Dret_0390  transcriptional regulator, XRE family  38.6 
 
 		 135 aa  40.4  0.008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.116941  normal  0.945426 
 
 
-
 
NC_007794  Saro_3015  putative prophage repressor  31.03 
 
 		 227 aa  40.4  0.009  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_008639  Cpha266_0938  helix-turn-helix domain-containing protein  41.3 
 
 		 155 aa  40.4  0.009  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_1286  transcriptional regulator, XRE family  36.54 
 
 		 197 aa  40  0.01  Eggerthella lenta DSM 2243  Bacteria  normal  0.0709374  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>