18 homologs were found in PanDaTox collection
for query gene Ppha_1851 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011060  Ppha_1851  transcriptional regulator, XRE family  100 
 
 		 160 aa  319  9.000000000000001e-87  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
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NC_008639  Cpha266_0938  helix-turn-helix domain-containing protein  50.66 
 
 		 155 aa  136  1e-31  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
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NC_010831  Cphamn1_2419  XRE family plasmid maintenance system antidote protein  52.69 
 
 		 157 aa  101  3e-21  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
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NC_013037  Dfer_0351  XRE family plasmid maintenance system antidote protein  46.43 
 
 		 111 aa  72.8  0.000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.598178  normal  0.107212 
 
 
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NC_007512  Plut_1808  XRE family transcriptional regulator  33.72 
 
 		 135 aa  50.1  0.00001  Chlorobium luteolum DSM 273  Bacteria  normal  0.0459623  normal  0.163421 
 
 
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NC_011060  Ppha_2712  transcriptional regulator, XRE family  37.31 
 
 		 134 aa  48.5  0.00004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
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NC_007514  Cag_1798  XRE family transcriptional regulator  37.14 
 
 		 135 aa  47.8  0.00006  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.853866  n/a   
 
 
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NC_010803  Clim_1480  transcriptional regulator, XRE family  42.37 
 
 		 134 aa  46.2  0.0002  Chlorobium limicola DSM 245  Bacteria  normal  0.204155  n/a   
 
 
-
 
NC_010483  TRQ2_1496  XRE family transcriptional regulator  36.36 
 
 		 110 aa  43.5  0.001  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
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NC_009486  Tpet_1451  helix-turn-helix domain-containing protein  36.36 
 
 		 127 aa  43.5  0.001  Thermotoga petrophila RKU-1  Bacteria  normal  1  n/a   
 
 
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NC_013037  Dfer_1519  transcriptional regulator, XRE family  32.93 
 
 		 97 aa  43.5  0.001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.37865  normal  0.680818 
 
 
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NC_013132  Cpin_4943  transcriptional regulator, XRE family  36.71 
 
 		 82 aa  43.1  0.001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.358741  normal  0.505342 
 
 
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NC_013172  Bfae_17690  UDP-N-acetylglucosamine 1-carboxyvinyltransferase  38.89 
 
 		 517 aa  43.9  0.001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.356525  n/a   
 
 
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NC_008554  Sfum_0490  Fis family transcriptional regulator  34.52 
 
 		 176 aa  42.7  0.002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.100624 
 
 
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NC_012669  Bcav_3260  transcriptional regulator, XRE family  27 
 
 		 513 aa  41.6  0.004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0795644  normal  0.23679 
 
 
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NC_013730  Slin_4822  XRE family plasmid maintenance system antidote protein  38.81 
 
 		 90 aa  41.2  0.006  Spirosoma linguale DSM 74  Bacteria  normal  0.246959  normal  0.144196 
 
 
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NC_013730  Slin_5326  transcriptional regulator, XRE family  46.94 
 
 		 68 aa  41.2  0.006  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.134062 
 
 
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NC_012850  Rleg_1609  transcriptional regulator, AsnC family  57.89 
 
 		 153 aa  40.8  0.008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.177256  normal  1 
 
 
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