Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2712 |
Symbol | |
ID | 6462602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2804643 |
End bp | 2805047 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642728872 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002019487 |
Protein GI | 194337693 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCAT TGCTCAGAAA AGCGGCAGCG GCGGTATCGC CCACTACAAG GAGGTTTGTT GAGCGTCAGG GTGCGTTTGC GGTAAGGGTT ACTGAAATCA TGAAAGTGAG CGGTATAACT CAGCGTCAAC TTGCCGAAAA GCTTGGTAAA AACGAGTCGT ACATCAGCCG GATAGTTGCC GGATGGGCCA ATCCGACACT GAAAACTATT GTTGAATTTG AGGTTGCACT TGGCCAGAAT GTCATTGAGA TTCCCTGTCA GCATAAAAGC GAGGGGAGCA CCGTTATTGG TGATGATAGC GTGTGGGAGT TGGGTGAAGG GGTGAAGAGC ACCAGTATGC CTGCCCTTTG TATTGGTACA AAAATTTATT TCATAAACAG TGCGGGACAT TCAATGGTTG GTTGA
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Protein sequence | MTSLLRKAAA AVSPTTRRFV ERQGAFAVRV TEIMKVSGIT QRQLAEKLGK NESYISRIVA GWANPTLKTI VEFEVALGQN VIEIPCQHKS EGSTVIGDDS VWELGEGVKS TSMPALCIGT KIYFINSAGH SMVG
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