| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1851 |
|---|
| Symbol | |
|---|
| ID | 6463371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1945165 |
|---|
| End bp | 1945647 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642728061 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002018695 |
|---|
| Protein GI | 194336901 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATAA GCAACATGAA AGAAAAAATT GATAACCTCC TGTCAAAAGA GCCTTCGAGG
TGGATGGAAA AAGCGTTACG CGATGAGGTA AATGAGGCTT GGCTGGAGAG GTCTTCCAAT
ATTGCACTGC GTATTCTTGG TGCTTTACAG GCAAATAGAA TGACGCAGAA AGAGCTTGCT
GAAAAAACCG GAGTCAGCCC TCAGCAGGTA AGCAAACTGC TCAAAGGGAA TGAAAATCTT
ACCCTTGAAA CCATAGCAAA GTTTGAGGCT GCCCTTTGTA TAGTGCTCAT TGCAATACCG
GAAAGCGTTA GCGGGAGTGA GGCTGAATTG AGCACTGCAC ACGTTCAAAA AAAATCTGCA
TCAAGGATAA GAGGATCAAA AGCTTTGCTA TCCGCTCCTC AAGGCCGTGC AGCAGAAAAA
GTTCACGAAG CCGGGTCAGG TTATGGAAAA AAGGCAAGGA AAAAGGTAAA CATCAGAGGT
TAA
|
|---|
| Protein sequence | MTISNMKEKI DNLLSKEPSR WMEKALRDEV NEAWLERSSN IALRILGALQ ANRMTQKELA
EKTGVSPQQV SKLLKGNENL TLETIAKFEA ALCIVLIAIP ESVSGSEAEL STAHVQKKSA
SRIRGSKALL SAPQGRAAEK VHEAGSGYGK KARKKVNIRG
|
|---|
| |