29 homologs were found in PanDaTox collection
for query gene Bphy_6195 on replicon NC_010625
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010625  Bphy_6195  hypothetical protein  100 
 
 
84 aa  168  3e-41  Burkholderia phymatum STM815  Bacteria  normal  0.170725  normal  0.0606924 
 
 
-
 
NC_010625  Bphy_6773  histone family protein nucleoid-structuring protein H-NS  92.54 
 
 
112 aa  122  2e-27  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.00017117  normal  0.0671695 
 
 
-
 
NC_010623  Bphy_4587  histone family protein nucleoid-structuring protein H-NS  86.57 
 
 
112 aa  118  3.9999999999999996e-26  Burkholderia phymatum STM815  Bacteria  normal  normal  0.918729 
 
 
-
 
NC_010676  Bphyt_5701  hypothetical protein  67.14 
 
 
108 aa  94.7  4e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1018  hypothetical protein  67.14 
 
 
110 aa  94.4  5e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.0697598  normal  0.0957494 
 
 
-
 
NC_010676  Bphyt_4222  hypothetical protein  67.16 
 
 
108 aa  90.9  5e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  0.804885  normal 
 
 
-
 
NC_010622  Bphy_2172  histone family protein nucleoid-structuring protein H-NS  64.18 
 
 
108 aa  89.7  1e-17  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00000970391 
 
 
-
 
NC_007951  Bxe_A2592  hypothetical protein  60.34 
 
 
97 aa  73.2  0.000000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.658103  normal 
 
 
-
 
NC_010623  Bphy_3930  hypothetical protein  37.31 
 
 
85 aa  55.5  0.0000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1142  histone family protein nucleoid-structuring protein H-NS  42.42 
 
 
95 aa  53.9  0.0000008  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2777  hypothetical protein  43.28 
 
 
87 aa  53.5  0.0000009  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.0000000000000199644  normal 
 
 
-
 
NC_010623  Bphy_3892  hypothetical protein  39.39 
 
 
84 aa  48.5  0.00003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6763  hypothetical protein  46.27 
 
 
87 aa  46.2  0.0002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0430903  normal  0.248334 
 
 
-
 
NC_012791  Vapar_1795  histone family protein nucleoid-structuring protein H-NS  32.05 
 
 
114 aa  45.8  0.0002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5596  nucleoid protein H-NS  31.88 
 
 
102 aa  45.4  0.0003  Ralstonia eutropha JMP134  Bacteria  normal  0.16143  n/a   
 
 
-
 
NC_007974  Rmet_4462  histone-like nucleoid-structuring protein H-NS  40 
 
 
99 aa  44.3  0.0005  Cupriavidus metallidurans CH34  Bacteria  normal  0.168905  normal  0.0423453 
 
 
-
 
NC_007974  Rmet_3677  histone-like nucleoid-structuring protein H-NS  33.82 
 
 
102 aa  44.3  0.0005  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.166379 
 
 
-
 
NC_010681  Bphyt_3822  histone family protein nucleoid-structuring protein H-NS  34.43 
 
 
100 aa  44.3  0.0006  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000137841  normal 
 
 
-
 
NC_007951  Bxe_A0112  HNS-like transcriptional regulator  32.79 
 
 
100 aa  43.9  0.0009  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00000000000000994611  normal 
 
 
-
 
NC_008825  Mpe_A1370  nucleoid protein H-NS  34.67 
 
 
115 aa  42  0.003  Methylibium petroleiphilum PM1  Bacteria  normal  0.620152  normal 
 
 
-
 
NC_007336  Reut_C6348  hypothetical protein  40 
 
 
83 aa  42  0.003  Ralstonia eutropha JMP134  Bacteria  hitchhiker  0.00180642  n/a   
 
 
-
 
NC_012855  Rpic12D_5064  hypothetical protein  34.33 
 
 
95 aa  41.6  0.004  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4348  histone family protein nucleoid-structuring protein H-NS  30.77 
 
 
102 aa  40.8  0.006  Ralstonia pickettii 12D  Bacteria  normal  normal  0.513312 
 
 
-
 
NC_010678  Rpic_4238  histone family protein nucleoid-structuring protein H-NS  30.77 
 
 
102 aa  40.8  0.006  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6084  histone family protein nucleoid-structuring protein H-NS  36.67 
 
 
99 aa  40.8  0.006  Burkholderia ambifaria MC40-6  Bacteria  normal  0.78955  normal 
 
 
-
 
NC_008758  Pnap_4578  histone family protein nucleoid-structuring protein H-NS  27.78 
 
 
121 aa  40.8  0.007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6382  histone family protein nucleoid-structuring protein H-NS  36.67 
 
 
99 aa  40.4  0.008  Burkholderia ambifaria AMMD  Bacteria  normal  0.193522  normal  0.0275568 
 
 
-
 
NC_008760  Pnap_4730  histone family protein nucleoid-structuring protein H-NS  26.67 
 
 
121 aa  40.4  0.009  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.167387  normal 
 
 
-
 
NC_007336  Reut_C6383  hypothetical protein  64 
 
 
91 aa  40  0.01  Ralstonia eutropha JMP134  Bacteria  normal  0.621443  n/a   
 
 
-
 
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