46 homologs were found in PanDaTox collection
for query gene Ndas_4135 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_4135  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
188 aa  368  1e-101  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5041  putative anti-sigma regulatory factor, serine/threonine protein kinase  47.57 
 
 
197 aa  132  1.9999999999999998e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.486269 
 
 
-
 
NC_014210  Ndas_2582  putative signal transduction histidine kinase  40 
 
 
150 aa  61.2  0.000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0114014 
 
 
-
 
NC_013595  Sros_3148  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.6 
 
 
146 aa  60.5  0.00000001  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00947281  normal 
 
 
-
 
NC_013510  Tcur_3632  ATP-binding region ATPase domain protein  40.4 
 
 
161 aa  59.3  0.00000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8587  putative signal transduction histidine kinase  34.71 
 
 
158 aa  58.5  0.00000005  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00197112  normal  0.613164 
 
 
-
 
NC_014210  Ndas_4246  putative signal transduction histidine kinase  40 
 
 
164 aa  57.8  0.0000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.103074 
 
 
-
 
NC_014210  Ndas_0531  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.57 
 
 
207 aa  57.8  0.0000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.111836  normal 
 
 
-
 
NC_013131  Caci_0014  putative signal transduction histidine kinase  36.07 
 
 
160 aa  57  0.0000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2770  putative signal transduction histidine kinase  36.11 
 
 
150 aa  55.5  0.0000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.416371  normal 
 
 
-
 
NC_013510  Tcur_1945  putative anti-sigma regulatory factor, serine/threonine protein kinase  44.59 
 
 
142 aa  54.7  0.0000007  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00291504  n/a   
 
 
-
 
NC_014210  Ndas_1650  putative signal transduction histidine kinase  36.47 
 
 
150 aa  53.9  0.000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0223546  normal 
 
 
-
 
NC_013510  Tcur_4605  putative anti-sigma regulatory factor, serine/threonine protein kinase  43.96 
 
 
155 aa  53.5  0.000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6480  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
134 aa  53.1  0.000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.903724  normal  0.217215 
 
 
-
 
NC_014210  Ndas_1873  putative signal transduction histidine kinase  34.02 
 
 
149 aa  53.5  0.000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0976  hypothetical protein  37.6 
 
 
158 aa  52.8  0.000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0150  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.5 
 
 
180 aa  50.8  0.00001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.460194 
 
 
-
 
NC_013595  Sros_8758  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.17 
 
 
192 aa  49.7  0.00003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1247  hypothetical protein  33.04 
 
 
148 aa  49.3  0.00004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_2108  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
151 aa  48.5  0.00005  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.262944 
 
 
-
 
NC_013510  Tcur_4370  putative signal transduction histidine kinase  32.26 
 
 
134 aa  48.5  0.00005  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0586  signal transduction histidine kinase, LytS  36.36 
 
 
123 aa  48.1  0.00007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0183303  hitchhiker  0.00998812 
 
 
-
 
NC_014211  Ndas_5201  protein serine phosphatase with GAF(s) sensor(s)  35.71 
 
 
728 aa  48.1  0.00007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.171311  normal  0.162808 
 
 
-
 
NC_013131  Caci_0019  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.95 
 
 
255 aa  47.8  0.0001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1500  anti-sigma regulatory kinase  36.28 
 
 
180 aa  47.4  0.0001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1805  hypothetical protein  32.14 
 
 
145 aa  47.4  0.0001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1655  hypothetical protein  33.33 
 
 
162 aa  47.8  0.0001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5447  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.16 
 
 
178 aa  46.6  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.279977  normal 
 
 
-
 
NC_007333  Tfu_2295  hypothetical protein  35.79 
 
 
200 aa  46.2  0.0003  Thermobifida fusca YX  Bacteria  normal  0.147419  n/a   
 
 
-
 
NC_007333  Tfu_2776  hypothetical protein  33.61 
 
 
137 aa  45.8  0.0004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_5025  putative signal transduction histidine kinase  34.78 
 
 
166 aa  45.4  0.0005  Salinispora arenicola CNS-205  Bacteria  normal  0.239464  normal  0.0584008 
 
 
-
 
NC_013510  Tcur_0095  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.1 
 
 
174 aa  45.1  0.0006  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4525  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.6 
 
 
130 aa  45.1  0.0006  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5315  protein serine phosphatase with GAF(s) sensor(s)  35.29 
 
 
750 aa  44.3  0.001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.315721 
 
 
-
 
NC_009380  Strop_4104  stage II sporulation E family protein  36.97 
 
 
694 aa  43.9  0.001  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3612  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.11 
 
 
185 aa  43.9  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7320  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.5 
 
 
288 aa  43.5  0.002  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.000252308  decreased coverage  0.00000000279842 
 
 
-
 
NC_014165  Tbis_0038  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.58 
 
 
151 aa  43.9  0.002  Thermobispora bispora DSM 43833  Bacteria  normal  0.536506  normal 
 
 
-
 
NC_009921  Franean1_5624  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.95 
 
 
143 aa  42.4  0.004  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.000415643  normal 
 
 
-
 
NC_007333  Tfu_1352  hypothetical protein  35 
 
 
145 aa  42.4  0.004  Thermobifida fusca YX  Bacteria  normal  0.935548  n/a   
 
 
-
 
NC_013510  Tcur_0429  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.35 
 
 
196 aa  42  0.005  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1416  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.52 
 
 
151 aa  42  0.006  Thermomonospora curvata DSM 43183  Bacteria  normal  0.034656  n/a   
 
 
-
 
NC_009664  Krad_4348  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
119 aa  41.6  0.007  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00391365  normal 
 
 
-
 
NC_007333  Tfu_0979  hypothetical protein  29.87 
 
 
201 aa  41.6  0.007  Thermobifida fusca YX  Bacteria  normal  0.454512  n/a   
 
 
-
 
NC_009664  Krad_4276  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.97 
 
 
180 aa  41.2  0.009  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0915518  normal  0.326932 
 
 
-
 
NC_007333  Tfu_0704  hypothetical protein  34.4 
 
 
176 aa  41.2  0.01  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
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