Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8587 |
Symbol | |
ID | 8339969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9958097 |
End bp | 9958573 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644961672 |
Product | putative signal transduction histidine kinase |
Protein accession | YP_003119247 |
Protein GI | 256397683 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00197112 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.613164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTCT GGTCCAGGGG GTTCGCCGGT CGGCCGGAGT GCCTGAGTGA GGTCCGCTGC TTCATCCTCG CCGTTCTCGG CGACTGCGAT ACCGCGCACG TCGTCGCGCT GATCGCCGAC GAGCTGGTTG CCAACGCCAT CAAGCACACG GCCAGCGGCG GACCTGGAGG GGAACTCGTC CTGCGGCTGA CCAGGTTCGC CGACCGGTGC CGGGTGCGCG TTGACGACCA GGGCGGGTCC ACCATGCCTG CGGTCCGCGT CGCCGAGGAC GACGAGGAGG CCGGGCGAGG CCTGACCATT GTCGCGCTTT TGTCCGCCCA CTGGGGCGTG GACGGCGACG AGAAGGCCCG CTCGGTCTGG GCCGAGATCA CCTTTGACGA GGTCGCGGCG ATACCCGGGC CGCCGGCCAA TGGCCTTCCC CGCGAGTTGA GAACTAGACG AGAGGTCGGT ATGGCGATGG ACGACAGGAC GCGTTGA
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Protein sequence | MQVWSRGFAG RPECLSEVRC FILAVLGDCD TAHVVALIAD ELVANAIKHT ASGGPGGELV LRLTRFADRC RVRVDDQGGS TMPAVRVAED DEEAGRGLTI VALLSAHWGV DGDEKARSVW AEITFDEVAA IPGPPANGLP RELRTRREVG MAMDDRTR
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