| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4104 |
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| Symbol | |
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| ID | 5060586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4666159 |
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| End bp | 4668243 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640476365 |
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| Product | stage II sporulation E family protein |
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| Protein accession | YP_001160912 |
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| Protein GI | 145596615 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase)
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGCGG AGAGGGGGCC CGCGCCGACC GAAGGCCGGG ACGAGCGCAT CCGACGAGTC
CGGCTCCCCG CCGATCCCCG AACGCCCGCT GCGGCCCGCG CACTCGTCCG GTCGATACTC
GCCGAGGCGG ACCTGCCGGA GCTGACCAAC GAGGCGCTCC TGCTCACCAC CGAGCTCTCC
ACCAACGCGG TGGAGCACGC CCGCACCGAA CTGGACCTCG AGGTCGTCGC CGACCGCCTG
GGTCTCACCG TCACCGTCTC CGACTTCGCC CGTGGGCCGG TCGAGGAGCT GACCGTTGGC
GTTCGCAACG AGAGCAGCGA CATCGCCGAC ATCTCCGAAC GGGGCCGAGG CCTGCTCCTG
GTTGACCACT TCGCCAGCCG GTGGGGCACC ACGTACCTGC CCACCGGCAA GGGTGTCTGG
TTCCGGCTCG ACCGGCCCGG CTTCATCGAT CACCCCTGCC GGCCCCCGGT CACCGCCGTG
CCAGCTACGG CGGCGGTAAA CGGTGACCAC ACCGCCGGCG AGGGCAGCTT CACGCCGAGC
GCCGCGGCGA TGAGTGAGCT GATGCAGACC GCACCCGACC CGTACGCGGA GGACTCCCTG
CCGGACTTCG CGACCAGCCT GTTGACGCGG GTGGCCGAGA TGGTTGGCGC GGCCGGTGGC
CTGGTCCGGC TGGACCGGGG CGACGGGCAG GGTCCGCAGC TACTGGCCCG CTTCGGCCGG
CAACCCCGAA TCGACAACGA TCTGGTACGG GTGCCGCTGA CCGTGCACCG GCCGTACGTC
GGCGAGCTGG AGCTGGACGC GGCGCCGTCC GCGTACGCCC GACCGCTGGC GGCGTTGATG
GCGGAGCGAC TCTCACTGCA CCTGGAGAAC GACCGGCTGC GCCGGGCCGA CCTGCGCCGG
CAGGCCTGGC TGACCTTCCT CGCCGAGGCA AGTGAGTTGC TCGCCCAGTC CCTCGACGTC
GAGTTGACCA TGGCGCTCAT CCCGCAGCTC GTGGTACCCC GACTGGGGCA GTGGTGCGCG
GTGCACACCA GCAATGAGTG GGGGCAGCTA CGCCTGGCGG CGGCCAGCCA CGCGGACGAG
TCCCTGCTGC CCCAACTACA CACCGTGCTG GCGGAGACCG GGCCGAACTC GATCCAGTCC
CGGTTGCGGG AGGCCTCCCG CAACGGCACT CAGCTCCCGC TCGGCGCCCC GACCGAGGGC
TTCGCCGTCC CGCTGATCGC CCGGGGCCAG CGACTCGGCA CCCTCGCTGT CGGTCGGCAC
CAGCGGCACC GGCACGACCC GGACGAGGTC GCCGTACTGG AAGATGTGGC CCGGCGGGCG
GCGCTGGCGA TCGAGAACGC TCGTATCCAC GCCGAGCGCC GCCGGGTCGC GCAGGCGCTC
CAGCAGTCGC TACTGCCACC CGTGCTGCCG GTGGTGGAGG GAATCGGCTT CGCCGCGGAG
TACGTCCCGA CCGGGGACGA CGCGGACGTC GGCGGCGACT TCTACGACGT GCTGCCGCTG
CCGGACGGGC GGTGGCTGGT GGTGATCGGT GACGTCTCCG GCAAGGGAGT GCAGGCGGCC
ACCCTCACCG GCCTGGTCCG GGATGTCATC CGGACGCTGA TCGGGGACGG CAAACCGCTG
TCGGAGGCGC TGACCCGGCT GAACGGGACC CTGGTCGAGC GGGGCGGCGG GCGATACTGC
ACCCTGGCCC TGGCCGCGGT CGGACCGGGT CCGGGCAACC AACTGGAGGT CTGCCTGTAC
CTCGCCGGGC ACGACCGGCC GGTGCTGCTG ACTGCCGCCG GTGAGGCCCG GTTCGTCGGC
ACCGGCGGCA CCGCGCTCGG GCTACTCGAC TCGATCGCCT CGCCGGCCAC CGAGCTCACC
CTGGACCCCG GCGAGGCATT GATCTTCTAC ACCGACGGGG TCACCGAGCG GCGGCGCGGG
CGGGAGCTCT TCGGGGTGGA TCGGCTCCGG GAGGCAACCG CCCCGCTCGC CGGCTACTCG
GCGGATGTCG TGGCGGCGCG GCTGCGCTCG ACCGCGCTCG GGTTCTCCAC CGAGACGCCC
CGGGACGACA TCGCGATCCT GGTCCTGCGC AACGACGCCG GCTAG
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| Protein sequence | MSAERGPAPT EGRDERIRRV RLPADPRTPA AARALVRSIL AEADLPELTN EALLLTTELS
TNAVEHARTE LDLEVVADRL GLTVTVSDFA RGPVEELTVG VRNESSDIAD ISERGRGLLL
VDHFASRWGT TYLPTGKGVW FRLDRPGFID HPCRPPVTAV PATAAVNGDH TAGEGSFTPS
AAAMSELMQT APDPYAEDSL PDFATSLLTR VAEMVGAAGG LVRLDRGDGQ GPQLLARFGR
QPRIDNDLVR VPLTVHRPYV GELELDAAPS AYARPLAALM AERLSLHLEN DRLRRADLRR
QAWLTFLAEA SELLAQSLDV ELTMALIPQL VVPRLGQWCA VHTSNEWGQL RLAAASHADE
SLLPQLHTVL AETGPNSIQS RLREASRNGT QLPLGAPTEG FAVPLIARGQ RLGTLAVGRH
QRHRHDPDEV AVLEDVARRA ALAIENARIH AERRRVAQAL QQSLLPPVLP VVEGIGFAAE
YVPTGDDADV GGDFYDVLPL PDGRWLVVIG DVSGKGVQAA TLTGLVRDVI RTLIGDGKPL
SEALTRLNGT LVERGGGRYC TLALAAVGPG PGNQLEVCLY LAGHDRPVLL TAAGEARFVG
TGGTALGLLD SIASPATELT LDPGEALIFY TDGVTERRRG RELFGVDRLR EATAPLAGYS
ADVVAARLRS TALGFSTETP RDDIAILVLR NDAG
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