13 decreased-coverage genes were found for selected organism/s



Page 1 of 1    << first  < prev  1  next >  last >>   


Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Rleg_5434    NC_012853  15832  16072  -  241      normal  1  decreased coverage  0.000759745  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5435    NC_012853  16102  16262  -  161      normal  1  decreased coverage  0.000740847  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5436  CDS  NC_012853  16322  17023  -  702  protein of unknown function DUF1223  YP_002978810  normal  1  decreased coverage  0.000960294  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5485  CDS  NC_012853  70069  72516  +  2448  conjugal transfer protein TrbE  YP_002978853  decreased coverage  0.00798845  normal  1  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5530  CDS  NC_012853  116724  118025  -  1302  Acyl-CoA dehydrogenase type 2 domain protein  YP_002978897  normal  0.061721  decreased coverage  0.00000254455  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5531  CDS  NC_012853  118071  118622  -  552  flavin reductase domain protein FMN-binding  YP_002978898  normal  0.0259957  decreased coverage  0.00000136774  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5532  CDS  NC_012853  118782  119309  +  528  transcriptional regulator, MarR family  YP_002978899  decreased coverage  0.008053  hitchhiker  0.0000039263  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5541  CDS  NC_012853  128135  128998  -  864  intradiol ring-cleavage dioxygenase  YP_002978908  decreased coverage  0.000749052  hitchhiker  0.0000194786  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5597  CDS  NC_012853  178752  178991  +  240  hypothetical protein  YP_002978963  normal  1  decreased coverage  0.000927603  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5598  CDS  NC_012853  178993  179712  -  720  putative transcriptional regulator, Crp/Fnr family  YP_002978964  normal  1  decreased coverage  0.00118165  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5603  CDS  NC_012853  183650  186949  -  3300  DNA polymerase III, alpha subunit  YP_002978969  normal  1  decreased coverage  0.00446711  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5604  CDS  NC_012853  186946  188457  -  1512  hypothetical protein  YP_002978970  normal  1  decreased coverage  0.000770787  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Rleg_5609  CDS  NC_012853  191899  193065  +  1167  glycosyl transferase group 1  YP_002978974  normal  1  decreased coverage  0.000732254  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>