Gene Rleg_5436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5436 
Symbol 
ID8016745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp16322 
End bp17023 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content58% 
IMG OID644827610 
Productprotein of unknown function DUF1223 
Protein accessionYP_002978810 
Protein GI241518182 
COG category[S] Function unknown 
COG ID[COG5429] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.000960294 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAACGAT CGAAGGCCGT ATCCATAGCC AGCCATGTCG TGTTGGCGGT CATCGGATTA 
TCCGGATCTG CGTCCGCTGC GGATCGACCA CTCACCGTGG TCGAGCTCTT CACCAGCCAG
GGCTGCTCGT CCTGCCCGCC GGCGAACGCC AACCTGATCA AGCTGAGCAA GCGCGATGAT
GTTCTCACCC TGAGCTTTGC AGTAACCTAC TGGGATTATC TCGGCTGGAA GGACAGCTTT
GGCAAACGGG AATTCACCGA TCGCCAGGCT GTGTATGAAC CGGCGCTCGG CCAATCAGGC
TCGTACACAC CGCAGATGGT GGTCAACGGC AGGACGACAA CTGTCGGAAA TAACCTCGCT
GAAATCAAGC AGCTCGTTTC ACAGGCAAGT CCGCTGACAT CACCTTCCCT GACAGTTGGC
AAGAGTGCGG TCGCAATTGG CAGCGGGCGA ACGCCCGATG TGATCGCTGA TATCTGGTTA
GTCAGCTACG ATCCCAACCT TGTCGAAGTG CCTGTCGCTC GTGGCGAAAA CAGCGGTGAG
ACACTGCCAC ATATCCATGT CGTCCACGAC CTGACGCGGC TCGGTGGTTG GAACGGAAAA
GCTGTTTCCT ACAACTTTAC GCCCGTATCC GGCCGGCTGA AAACCGCCAT CCTCGTTCAA
GGAGCGCGGG GCGGAGCCAT TCTGTCAGCG GCCACTGACT AA
 
Protein sequence
MKRSKAVSIA SHVVLAVIGL SGSASAADRP LTVVELFTSQ GCSSCPPANA NLIKLSKRDD 
VLTLSFAVTY WDYLGWKDSF GKREFTDRQA VYEPALGQSG SYTPQMVVNG RTTTVGNNLA
EIKQLVSQAS PLTSPSLTVG KSAVAIGSGR TPDVIADIWL VSYDPNLVEV PVARGENSGE
TLPHIHVVHD LTRLGGWNGK AVSYNFTPVS GRLKTAILVQ GARGGAILSA ATD