Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5436 |
Symbol | |
ID | 8016745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 16322 |
End bp | 17023 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644827610 |
Product | protein of unknown function DUF1223 |
Protein accession | YP_002978810 |
Protein GI | 241518182 |
COG category | [S] Function unknown |
COG ID | [COG5429] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.000960294 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACGAT CGAAGGCCGT ATCCATAGCC AGCCATGTCG TGTTGGCGGT CATCGGATTA TCCGGATCTG CGTCCGCTGC GGATCGACCA CTCACCGTGG TCGAGCTCTT CACCAGCCAG GGCTGCTCGT CCTGCCCGCC GGCGAACGCC AACCTGATCA AGCTGAGCAA GCGCGATGAT GTTCTCACCC TGAGCTTTGC AGTAACCTAC TGGGATTATC TCGGCTGGAA GGACAGCTTT GGCAAACGGG AATTCACCGA TCGCCAGGCT GTGTATGAAC CGGCGCTCGG CCAATCAGGC TCGTACACAC CGCAGATGGT GGTCAACGGC AGGACGACAA CTGTCGGAAA TAACCTCGCT GAAATCAAGC AGCTCGTTTC ACAGGCAAGT CCGCTGACAT CACCTTCCCT GACAGTTGGC AAGAGTGCGG TCGCAATTGG CAGCGGGCGA ACGCCCGATG TGATCGCTGA TATCTGGTTA GTCAGCTACG ATCCCAACCT TGTCGAAGTG CCTGTCGCTC GTGGCGAAAA CAGCGGTGAG ACACTGCCAC ATATCCATGT CGTCCACGAC CTGACGCGGC TCGGTGGTTG GAACGGAAAA GCTGTTTCCT ACAACTTTAC GCCCGTATCC GGCCGGCTGA AAACCGCCAT CCTCGTTCAA GGAGCGCGGG GCGGAGCCAT TCTGTCAGCG GCCACTGACT AA
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Protein sequence | MKRSKAVSIA SHVVLAVIGL SGSASAADRP LTVVELFTSQ GCSSCPPANA NLIKLSKRDD VLTLSFAVTY WDYLGWKDSF GKREFTDRQA VYEPALGQSG SYTPQMVVNG RTTTVGNNLA EIKQLVSQAS PLTSPSLTVG KSAVAIGSGR TPDVIADIWL VSYDPNLVEV PVARGENSGE TLPHIHVVHD LTRLGGWNGK AVSYNFTPVS GRLKTAILVQ GARGGAILSA ATD
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