Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5532 |
Symbol | |
ID | 8016423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | + |
Start bp | 118782 |
End bp | 119309 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644827699 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_002978899 |
Protein GI | 241518271 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.008053 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000039263 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTGATA GCAGCGATCG ACCAATTTCT CAGGCGCAAC GGGTATTCGA TGAACTTGTC CGGCAATGGG AACTTGATTT TCCCGGCGAG GATAGTTCAC CGATAGCGAT CGCCATGAGA ATACGTCACC TTCATCAGTT GGATCAGGAA TCTCTGCAGG TGATTCTCGC GCCGTTTGGC CTCGGAGTGG GCGACATTGA CGTGCTCACA CACCTCTCTC AAGGGCCAGA AGGCCGTCCC ATTCGGCCGA GCGATCTGGC GGATCTTTGC ATGGTCACCA CCGGTGCCAT CACGGGGCGG CTCACGAAAC TGGAGCAGCG ATCTTACTTG AAGCGCGTGC CGCATCCTTC GGATAAGCGG ACCATATACG TTGAAATCAC GGACGCCGGC CAGGAGCTTT TGAACAAGAC GAGGGAGGAA GTTGCCAGGT CGTCGCACCT CCTTCAAGGC ATTCGTGCTC TCGAGAGATC TGAACGGCGC AACCTAGTCG AAACATTGGC CAAGTTGATT TCCATTCTGC CTTCATGA
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Protein sequence | MFDSSDRPIS QAQRVFDELV RQWELDFPGE DSSPIAIAMR IRHLHQLDQE SLQVILAPFG LGVGDIDVLT HLSQGPEGRP IRPSDLADLC MVTTGAITGR LTKLEQRSYL KRVPHPSDKR TIYVEITDAG QELLNKTREE VARSSHLLQG IRALERSERR NLVETLAKLI SILPS
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