29 homologs were found in PanDaTox collection
for query gene YpAngola_A3953 on replicon NC_010159
Organism: Yersinia pestis Angola



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010159  YpAngola_A3953  opacity-associated protein  100 
 
 
216 aa  441  1e-123  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3634  opacity-associated protein A  97.07 
 
 
246 aa  393  1e-108  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3779  opacity-associated protein A  97.07 
 
 
246 aa  393  1e-108  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0451  opacity-associated protein A  53.17 
 
 
224 aa  197  1.0000000000000001e-49  Serratia proteamaculans 568  Bacteria  normal  0.543433  hitchhiker  0.00503504 
 
 
-
 
NC_013421  Pecwa_3587  Opacity-associated protein A  42.23 
 
 
237 aa  139  4.999999999999999e-32  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.000352842  n/a   
 
 
-
 
NC_012912  Dd1591_0779  Opacity-associated protein A  43.54 
 
 
234 aa  123  2e-27  Dickeya zeae Ech1591  Bacteria  unclonable  0.0000149639  n/a   
 
 
-
 
NC_012880  Dd703_0799  Opacity-associated protein A  40.48 
 
 
239 aa  117  1.9999999999999998e-25  Dickeya dadantii Ech703  Bacteria  unclonable  0.000000409608  n/a   
 
 
-
 
NC_012917  PC1_3430  Opacity-associated protein A  39.51 
 
 
237 aa  110  2.0000000000000002e-23  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.000719849  n/a   
 
 
-
 
CP001637  EcDH1_3787  Opacity-associated protein A  39.39 
 
 
212 aa  98.6  6e-20  Escherichia coli DH1  Bacteria  decreased coverage  0.00000000000000889523  n/a   
 
 
-
 
NC_009800  EcHS_A4456  opacity-associated family protein  39.39 
 
 
212 aa  98.6  6e-20  Escherichia coli HS  Bacteria  decreased coverage  2.92011e-19  n/a   
 
 
-
 
NC_011353  ECH74115_5723  opacity-associated family protein  39.39 
 
 
212 aa  97.8  1e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  unclonable  0.00000000313576  normal 
 
 
-
 
NC_010658  SbBS512_E4746  opacity-associated family protein  38.79 
 
 
212 aa  96.7  3e-19  Shigella boydii CDC 3083-94  Bacteria  unclonable  0.00000000000000152643  n/a   
 
 
-
 
NC_011080  SNSL254_A4756  opacity-associated protein A  41.42 
 
 
211 aa  94  2e-18  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  unclonable  0.0000275862  normal 
 
 
-
 
NC_011083  SeHA_C4814  opacity-associated protein A  41.42 
 
 
211 aa  94  2e-18  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  unclonable  0.0000309624  normal 
 
 
-
 
NC_009436  Ent638_0376  opacity-associated protein A  37.25 
 
 
210 aa  93.2  2e-18  Enterobacter sp. 638  Bacteria  hitchhiker  0.0000862329  normal  0.148775 
 
 
-
 
NC_011205  SeD_A4792  opacity-associated protein A  41.42 
 
 
211 aa  94  2e-18  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  unclonable  0.0000154437  normal 
 
 
-
 
NC_011094  SeSA_A4664  opacity-associated protein A  41.42 
 
 
211 aa  92.8  4e-18  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  unclonable  0.000000808092  normal 
 
 
-
 
NC_011149  SeAg_B4674  opacity-associated protein A  41.42 
 
 
211 aa  92.8  4e-18  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000000000152862  n/a   
 
 
-
 
NC_010468  EcolC_3800  opacity-associated protein A  38.79 
 
 
212 aa  88.6  6e-17  Escherichia coli ATCC 8739  Bacteria  unclonable  0.0000000303652  normal  0.850161 
 
 
-
 
CP001509  ECD_04078  predicted cell envelope opacity-associated protein  38.79 
 
 
212 aa  88.6  6e-17  Escherichia coli BL21(DE3)  Bacteria  decreased coverage  0.0000081403  n/a   
 
 
-
 
NC_012892  B21_04041  hypothetical protein  38.79 
 
 
212 aa  88.6  6e-17  Escherichia coli BL21  Bacteria  decreased coverage  0.00000849189  n/a   
 
 
-
 
NC_010498  EcSMS35_4683  opacity-associated family protein  40.12 
 
 
209 aa  86.3  4e-16  Escherichia coli SMS-3-5  Bacteria  decreased coverage  0.0000000121219  normal 
 
 
-
 
NC_009783  VIBHAR_00758  hypothetical protein  31.5 
 
 
250 aa  54.7  0.000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_001713  hypothetical protein  44.9 
 
 
198 aa  48.5  0.00007  Vibrio sp. Ex25  Bacteria  hitchhiker  0.000000523038  n/a   
 
 
-
 
NC_011312  VSAL_I0407  opacity-associated protein A  41.67 
 
 
220 aa  48.1  0.00009  Aliivibrio salmonicida LFI1238  Bacteria  unclonable  0.000035664  n/a   
 
 
-
 
NC_010159  YpAngola_A0450  thiazole biosynthesis protein ThiH  63.64 
 
 
196 aa  47.8  0.0001  Yersinia pestis Angola  Bacteria  normal  hitchhiker  0.00000180873 
 
 
-
 
NC_010159  YpAngola_A2878  insertion sequence transposase  100 
 
 
178 aa  43.1  0.003  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A0134  hypothetical protein  100 
 
 
61 aa  42.4  0.005  Yersinia pestis Angola  Bacteria  normal  normal  0.0334159 
 
 
-
 
NC_011138  MADE_01618  Peptidase, M23/M37 family protein  31.37 
 
 
441 aa  42  0.007  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
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