32 homologs were found in PanDaTox collection
for query gene VSAL_I0407 on replicon NC_011312
Organism: Aliivibrio salmonicida LFI1238



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011312  VSAL_I0407  opacity-associated protein A  100 
 
 
220 aa  450  1.0000000000000001e-126  Aliivibrio salmonicida LFI1238  Bacteria  unclonable  0.000035664  n/a   
 
 
-
 
NC_013456  VEA_001713  hypothetical protein  42.33 
 
 
198 aa  135  4e-31  Vibrio sp. Ex25  Bacteria  hitchhiker  0.000000523038  n/a   
 
 
-
 
NC_009783  VIBHAR_00758  hypothetical protein  42.71 
 
 
250 aa  134  9.999999999999999e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013421  Pecwa_3587  Opacity-associated protein A  28.96 
 
 
237 aa  85.9  4e-16  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.000352842  n/a   
 
 
-
 
NC_009436  Ent638_0376  opacity-associated protein A  25.81 
 
 
210 aa  82.4  0.000000000000005  Enterobacter sp. 638  Bacteria  hitchhiker  0.0000862329  normal  0.148775 
 
 
-
 
CP001637  EcDH1_3787  Opacity-associated protein A  26.94 
 
 
212 aa  80.9  0.00000000000001  Escherichia coli DH1  Bacteria  decreased coverage  0.00000000000000889523  n/a   
 
 
-
 
NC_009800  EcHS_A4456  opacity-associated family protein  26.94 
 
 
212 aa  80.9  0.00000000000001  Escherichia coli HS  Bacteria  decreased coverage  2.92011e-19  n/a   
 
 
-
 
NC_011205  SeD_A4792  opacity-associated protein A  30.11 
 
 
211 aa  80.1  0.00000000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  unclonable  0.0000154437  normal 
 
 
-
 
NC_011083  SeHA_C4814  opacity-associated protein A  30.11 
 
 
211 aa  80.1  0.00000000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  unclonable  0.0000309624  normal 
 
 
-
 
NC_011080  SNSL254_A4756  opacity-associated protein A  30.11 
 
 
211 aa  80.1  0.00000000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  unclonable  0.0000275862  normal 
 
 
-
 
NC_010498  EcSMS35_4683  opacity-associated family protein  30.77 
 
 
209 aa  80.5  0.00000000000002  Escherichia coli SMS-3-5  Bacteria  decreased coverage  0.0000000121219  normal 
 
 
-
 
NC_011353  ECH74115_5723  opacity-associated family protein  27.55 
 
 
212 aa  80.1  0.00000000000003  Escherichia coli O157:H7 str. EC4115  Bacteria  unclonable  0.00000000313576  normal 
 
 
-
 
NC_011149  SeAg_B4674  opacity-associated protein A  29.03 
 
 
211 aa  79.7  0.00000000000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000000000152862  n/a   
 
 
-
 
NC_011094  SeSA_A4664  opacity-associated protein A  29.03 
 
 
211 aa  79.7  0.00000000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  unclonable  0.000000808092  normal 
 
 
-
 
NC_009708  YpsIP31758_3634  opacity-associated protein A  29.28 
 
 
246 aa  79  0.00000000000005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3779  opacity-associated protein A  29.28 
 
 
246 aa  79  0.00000000000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0779  Opacity-associated protein A  41.57 
 
 
234 aa  79  0.00000000000006  Dickeya zeae Ech1591  Bacteria  unclonable  0.0000149639  n/a   
 
 
-
 
NC_010658  SbBS512_E4746  opacity-associated family protein  26.42 
 
 
212 aa  78.6  0.00000000000007  Shigella boydii CDC 3083-94  Bacteria  unclonable  0.00000000000000152643  n/a   
 
 
-
 
CP001509  ECD_04078  predicted cell envelope opacity-associated protein  26.42 
 
 
212 aa  75.5  0.0000000000005  Escherichia coli BL21(DE3)  Bacteria  decreased coverage  0.0000081403  n/a   
 
 
-
 
NC_010468  EcolC_3800  opacity-associated protein A  26.42 
 
 
212 aa  75.5  0.0000000000005  Escherichia coli ATCC 8739  Bacteria  unclonable  0.0000000303652  normal  0.850161 
 
 
-
 
NC_012892  B21_04041  hypothetical protein  26.42 
 
 
212 aa  75.5  0.0000000000005  Escherichia coli BL21  Bacteria  decreased coverage  0.00000849189  n/a   
 
 
-
 
NC_012917  PC1_3430  Opacity-associated protein A  40 
 
 
237 aa  73.6  0.000000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.000719849  n/a   
 
 
-
 
NC_012880  Dd703_0799  Opacity-associated protein A  27.27 
 
 
239 aa  69.7  0.00000000003  Dickeya dadantii Ech703  Bacteria  unclonable  0.000000409608  n/a   
 
 
-
 
NC_009832  Spro_0451  opacity-associated protein A  25.14 
 
 
224 aa  66.2  0.0000000004  Serratia proteamaculans 568  Bacteria  normal  0.543433  hitchhiker  0.00503504 
 
 
-
 
NC_008309  HS_1287  opacity associated protein A  33.33 
 
 
402 aa  51.6  0.000008  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.000000183549  n/a   
 
 
-
 
NC_010159  YpAngola_A3953  opacity-associated protein  26.67 
 
 
216 aa  48.9  0.00006  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0994  peptidase M23B  28.1 
 
 
470 aa  46.2  0.0004  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.000818534  n/a   
 
 
-
 
NC_008740  Maqu_0696  peptidase M23B  29.41 
 
 
459 aa  45.8  0.0005  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000424266  n/a   
 
 
-
 
NC_009656  PSPA7_0808  hypothetical protein  23.36 
 
 
468 aa  43.1  0.003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0111068  n/a   
 
 
-
 
NC_011071  Smal_0299  Peptidase M23  28.77 
 
 
490 aa  43.1  0.003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0751276  normal  0.0202035 
 
 
-
 
NC_009439  Pmen_3928  peptidase M23B  33.65 
 
 
475 aa  42.4  0.006  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.0000103245  normal 
 
 
-
 
NC_008463  PA14_08540  hypothetical protein  25 
 
 
447 aa  42.4  0.006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000156584  decreased coverage  0.00000000118926 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>