Gene ECH74115_5723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5723 
Symbol 
ID6968691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5358753 
End bp5359391 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID643389356 
Productopacity-associated family protein 
Protein accessionYP_002273749 
Protein GI209400063 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3061] Cell envelope opacity-associated protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000313576 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGGC GCTTTGAACT AAAACCAACC CTGGAGAAAG TCTGGCACGC ACCGGACAAT 
TTTCGCTTCA TGGACCCGCT GCCGCCGATG CATCGTCGGG GGATCATTAT TGCCGCCATT
GTATTGGTGG TCGGATTTCT GCTTCCATCT GATGATACGC CCAACGCGCC GGTGGTGACG
CGTGAAGCGC AGTTAGATAT TCAGTCGCAA TCACAACCGC CGACAGAAGA ACAGCTGCGG
GCGCAATTAG TCACCCCACA AAATTATCCT GATCAGGTGG CTCCGGTCGC TCCAGAACCT
ATACAGGAAG GCCAGCCAGA AGAACAGCCG AAAACTACCC AAACGCAACC ATTCCAGCCA
GATAGCGGAA TTGATAATCA ATGGCGCTCT TACCGTGTCG AACCCGGTAA AACGATGGCG
CAGCTGTTCC GCGACCACGG ACTGCCCGCT ACCGATGTCT ATGCAATGGC GCAGGTAGAA
GGCGCGGGTA AGCCGCTGAG TAATTTGCAA AACGGGCAGA TGGTGAAAAT CCGCCAGAAC
GCCAGCGGCG TGGTGACGGG CTTAACCATT GATACGGGGA ATAATCAACA GGTCCTGTTC
ACCCGCCAGC CGGATGGCAG TTTTATTCGT GCGCGGTAG
 
Protein sequence
MPGRFELKPT LEKVWHAPDN FRFMDPLPPM HRRGIIIAAI VLVVGFLLPS DDTPNAPVVT 
REAQLDIQSQ SQPPTEEQLR AQLVTPQNYP DQVAPVAPEP IQEGQPEEQP KTTQTQPFQP
DSGIDNQWRS YRVEPGKTMA QLFRDHGLPA TDVYAMAQVE GAGKPLSNLQ NGQMVKIRQN
ASGVVTGLTI DTGNNQQVLF TRQPDGSFIR AR