9 homologs were found in PanDaTox collection
for query gene VEA_004286 on replicon NC_013456
Organism: Vibrio sp. Ex25



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013456  VEA_004286  type 4 fimbrial biogenesis protein PilW  100 
 
 
196 aa  398  9.999999999999999e-111  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0386  hypothetical protein  67.86 
 
 
200 aa  281  5.000000000000001e-75  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0669  hypothetical protein  34.98 
 
 
210 aa  138  6e-32  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0590656  n/a   
 
 
-
 
NC_009783  VIBHAR_01138  hypothetical protein  37.62 
 
 
210 aa  135  4e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013422  Hneap_0017  hypothetical protein  41.18 
 
 
343 aa  44.3  0.001  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0212  type IV pilus assembly protein PilW  39.39 
 
 
344 aa  44.3  0.001  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.041624 
 
 
-
 
NC_012880  Dd703_3012  hypothetical protein  25.96 
 
 
195 aa  43.1  0.003  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_11850  type IV pilus assembly hypothetical protein, PilW-like protein  33.33 
 
 
395 aa  41.6  0.007  Azotobacter vinelandii DJ  Bacteria  normal  0.983551  n/a   
 
 
-
 
NC_013421  Pecwa_3394  hypothetical protein  24.39 
 
 
203 aa  41.2  0.009  Pectobacterium wasabiae WPP163  Bacteria  normal  0.227741  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>