| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01138 |
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| Symbol | |
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| ID | 5553730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1154656 |
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| End bp | 1155288 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640906630 |
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| Product | hypothetical protein |
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| Protein accession | YP_001444355 |
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| Protein GI | 156973448 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATGT TTAACCAAAA AGGTGCCAGC CTCGTTGAGT TCATGATTGC TTCTTCTTTA
GGGCTGATCT CTCTCGCTAT TGTCGGTTCG CTTTATGTCA GTGGCCAAAA GGTGGCGATG
GAGCGCTCTA AAGAGCTGAT GTTATTGCAA AACACAGCCA GTGTTCTGCA GATGATGAAG
AGCGATATTC AGCGCGCAGG ATTTGATGGT GGCGATGGAA ATTCGGTCAA AATATCCGGT
GCAACTAACA CACTTTATAC CATTAGTGGC ACTGACTCTG GGCTTATTGC ATACGTTTAT
AACGTTGGGG TTTCTGGAGC TACGTCTTTG TATAAAAACG TGGTGTATGA GCAACGGGAT
GGCACACCTG AATCGCTCTT TGCGTGTGAA AAGAAGCAAG CCACTATATG GGATATCAAT
GATGTGGCCA ACCTCTCTGG TACAGGGATG TGTAACACAC TCTTCGACAA AAAGGCGATC
CACGTTAATC GGTTTGACCT TGTGAGTGAG GTACTAGAAA ACACCGACGC CAAGAGTGCT
CTAATAACCG TTACCTTGGG GACTGAATTG AAAGATGCGA CGAATATTCG TACGGAGCAG
TCCTTTACTG TGAAACAAAG GAACTGGCAA TAA
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| Protein sequence | MNMFNQKGAS LVEFMIASSL GLISLAIVGS LYVSGQKVAM ERSKELMLLQ NTASVLQMMK
SDIQRAGFDG GDGNSVKISG ATNTLYTISG TDSGLIAYVY NVGVSGATSL YKNVVYEQRD
GTPESLFACE KKQATIWDIN DVANLSGTGM CNTLFDKKAI HVNRFDLVSE VLENTDAKSA
LITVTLGTEL KDATNIRTEQ SFTVKQRNWQ
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