| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004286 |
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| Symbol | |
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| ID | 8558047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2970890 |
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| End bp | 2971480 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646407408 |
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| Product | type 4 fimbrial biogenesis protein PilW |
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| Protein accession | YP_003286909 |
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| Protein GI | 262395055 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTTGA ACAGTGCTAA ACAGCAGGGG AGTACACTTG TTGAGTTTAT GATTGCTGCG
TTGTTAGGAG TTGTCGCTTT GGGCATTGTT GGCGCAGTGT TTCTTTCTAA CCAAAAAACA
GCTGTGCAGC GAAGCAAGGA AATAATGCTA CTTCAGCAGA TGAGTAGTGT AATTCAACAA
GTGAAAGAGG ATATTCAGCG AGCTGGATTT AATGGTATTA CGACAAAATC AATGATGCTT
TCCGGTTCTC CTAGCGTTCT ATATCAACAA TCCGAAAAAA TCGGTTATGT TTATCGAAAT
ACAGCAAGCT CTGTGAGTAA TACGATATAT CGGTTAAAGG ATAATATGTT GGAATATTGC
CAGGATGATT CACCATCACC TTTAAGTGTC GTGTCTGCTG CTAGTGGATG TTTTGATCTT
TTTGATCCAA AGCAAATTAA AGTAACTCAA TTTGGTGTTA GTCGAACATT ACTATCAGGT
TCGTCAATAG ATAGTGCGTT TATTTCTATT TCAATGGCCG CTGAATTAAA AAATGATCCG
GCAATTTCTC ACGCCATTTT ATTACAAGTT CAGCAAAGGA ATTGGCAATG A
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| Protein sequence | MALNSAKQQG STLVEFMIAA LLGVVALGIV GAVFLSNQKT AVQRSKEIML LQQMSSVIQQ
VKEDIQRAGF NGITTKSMML SGSPSVLYQQ SEKIGYVYRN TASSVSNTIY RLKDNMLEYC
QDDSPSPLSV VSAASGCFDL FDPKQIKVTQ FGVSRTLLSG SSIDSAFISI SMAAELKNDP
AISHAILLQV QQRNWQ
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