| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_11850 |
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| Symbol | pilW |
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| ID | 7760127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1135783 |
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| End bp | 1136970 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643804087 |
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| Product | type IV pilus assembly hypothetical protein, PilW-like protein |
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| Protein accession | YP_002798389 |
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| Protein GI | 226943316 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.983551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC GTTTCAATGG CGGACGGCGG TCCGCCCGCA TATTCATTCA TTGCGCCCAG
ACCGGTTTCA GTCTGATCGA ATTGATGGTC GCCTCGACCA TCGGACTCTT GATCATGACG
GCGGTCTTGA CGCTGTTTCT CAATGTGAGT CGCACCAATG ATGAAATGGC CAAGACCAAT
ATGCTGATCG AGAATGGACG ATTCGCGATT CAGTTATTGC AGAACGATAT CGCCCATGCC
GGTTTCTGGG ATAGTTATAT TCCGGACTTC GACGATCTGA CAGTGACTGC GGTACCGGCC
GAGATTCCGG CTGTCGTTCC CGATCCTTGT CTGGCGTATT CTTCATGGAC AGCAGCGACT
CGTACCAGCC AGTTGGGAGT TCCGCTGCAG GTCCATGATT CGCCACCTTC CGAATGCGGG
GCCGTGATAA CCAATCGCAG AAGTGGTACC GATATTCTGG TGGTGCGCCA CTTGAATACC
TGCGTTGCTG GCGGCTGTGA AGCGGAAGAG AGCGGGAGAC TCTATTTTCA GGCATCCCGT
GCCCGTGGAG GCGACTGTCC CGCCAGCGTT TCTTCGGAGG CTCCATATAT ATTTTCCACC
GATCCTGCCG ATTTCGTCCT GCATGATCGC GACTGTACGA CTATCGCTTC CAGGCGAAGA
TTCCTTTCCC ATATCTACTA TATCCGCGAC TACGCGGTGA CGCTGGGAGA TGGTGTTCCG
ACCCTGGTGC GTTCGGAACT CGATCTGGAG GCTGGAGAGA TCAAGGCCAG ATCCGCCGTT
GTACTGATCG AGGGTATAGA AGGATTCAGG GTCGAGTTGG GCGTGGATCG GATCAGCGAT
TCCGGCAGGG ATATCATCGT CGAAAGTTCC GACGCAGATC CCTACAGGGA GGCGGTCGAG
TGGGCCGATA GGAAAAACCT GACCTCTCCC GTGAATCGTG GAGATGGCGT ACCGGACGAG
TTCGTTCATT GTTCGGGAGT TTGTTCGCTC GACAGGTTGA TCAATGTGGT CGCGGTGAAG
CTCCATCTGC TGGTGCGTGC TCAGACCGGC ACTCCCGGAT ATACGGACGG CAAGTCTTAT
ACCTTGGGGG AGCAGGCGGT CGCGGCCGCC AACGATGGTT TCAAGCGTCA TGTATTTTCC
ACGGTCGTCC GGCTGAACAA TGTTTCGGGA AGAAGGGAAA CGCCATGA
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| Protein sequence | MNKRFNGGRR SARIFIHCAQ TGFSLIELMV ASTIGLLIMT AVLTLFLNVS RTNDEMAKTN
MLIENGRFAI QLLQNDIAHA GFWDSYIPDF DDLTVTAVPA EIPAVVPDPC LAYSSWTAAT
RTSQLGVPLQ VHDSPPSECG AVITNRRSGT DILVVRHLNT CVAGGCEAEE SGRLYFQASR
ARGGDCPASV SSEAPYIFST DPADFVLHDR DCTTIASRRR FLSHIYYIRD YAVTLGDGVP
TLVRSELDLE AGEIKARSAV VLIEGIEGFR VELGVDRISD SGRDIIVESS DADPYREAVE
WADRKNLTSP VNRGDGVPDE FVHCSGVCSL DRLINVVAVK LHLLVRAQTG TPGYTDGKSY
TLGEQAVAAA NDGFKRHVFS TVVRLNNVSG RRETP
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