Gene VSAL_I0669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0669 
Symbol 
ID6986592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp748509 
End bp749141 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content33% 
IMG OID643379069 
Producthypothetical protein 
Protein accessionYP_002262187 
Protein GI209694259 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4966] Tfp pilus assembly protein PilW 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0590656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGAGCT CTATGGATAT AATTCCTGTT CATAAATACA AACAAAATGG CTCTTCACTT 
ATTGAGCTTC TGATCGCTTC ATTTATTGGG ATTATTGCAA TTAGTCTTGT TGGATCTATT 
TTTATTAATG GGCAACGTGT AGCAAAAAAC CGAGGCCTAG AATTACTACT AGCTCAAAAT 
CTAACGAGTA CAATGCAAAT TATAAAAAAC GATATCCAAA GAGCAGGATA CAACGGCACT 
GATGGACAGT CAGTAAAGCT ATCGGCTGCG ACAAATATTA TAGAAATAAC ACCAAATAGT 
ATTGGTTTTG TGTATCACAA AAAACTATCT GGAGCACAAA AAACTTACCA AAATGTAATA 
TATAAATACT CACCTTCCGA TAAAAAATTA AAAGTATGTG AAGAAGAAAC ACTCATAACA 
AACATAAAAA GTCTAACTAC CGTTAGTAAT TGCTATTCAC TTTTTGATAC TCAAAACATA 
CAAGTAACTA ATTTTTCAGT GTTACGTAAA CCGTTAATCA CAAGCTCCGC AACCTCATCA 
ATAATTGATA TTCGACTTGA TACTGAACTA GTAAATATAC CAACAATGAA AAAGGACTTA 
AGTTTCAGCG TCAAACAAAG GAATTGGCAA TAA
 
Protein sequence
MGSSMDIIPV HKYKQNGSSL IELLIASFIG IIAISLVGSI FINGQRVAKN RGLELLLAQN 
LTSTMQIIKN DIQRAGYNGT DGQSVKLSAA TNIIEITPNS IGFVYHKKLS GAQKTYQNVI 
YKYSPSDKKL KVCEEETLIT NIKSLTTVSN CYSLFDTQNI QVTNFSVLRK PLITSSATSS 
IIDIRLDTEL VNIPTMKKDL SFSVKQRNWQ