11 homologs were found in PanDaTox collection
for query gene TM1040_0958 on replicon NC_008044
Organism: Ruegeria sp. TM1040



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008044  TM1040_0958  TfoX domain-containing protein  100 
 
 		 111 aa  231  2.0000000000000002e-60  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_1352  TfoX domain protein  55.24 
 
 		 109 aa  127  6e-29  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.499558 
 
 
-
 
NC_007802  Jann_1825  TfoX-like  55.05 
 
 		 120 aa  107  7.000000000000001e-23  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.261493 
 
 
-
 
NC_010501  PputW619_0749  TfoX domain-containing protein  36.14 
 
 		 92 aa  52  0.000003  Pseudomonas putida W619  Bacteria  hitchhiker  0.00000000282068  decreased coverage  0.000000000000743098 
 
 
-
 
NC_007492  Pfl01_4795  TfoX-like  33.33 
 
 		 90 aa  50.4  0.000008  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.0000000150833  unclonable  0.0000206045 
 
 
-
 
NC_010322  PputGB1_4683  TfoX domain-containing protein  36.14 
 
 		 92 aa  50.1  0.000009  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.000000000000241401  unclonable  1.50639e-16 
 
 
-
 
NC_002947  PP_4685  hypothetical protein  36.14 
 
 		 92 aa  50.1  0.00001  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0000564607  hitchhiker  0.000171484 
 
 
-
 
NC_009512  Pput_4549  TfoX domain-containing protein  36.14 
 
 		 92 aa  50.1  0.00001  Pseudomonas putida F1  Bacteria  hitchhiker  0.000000271318  decreased coverage  0.00000000740957 
 
 
-
 
NC_008700  Sama_2346  TfoX family regulatory protein  36.36 
 
 		 92 aa  47.4  0.00007  Shewanella amazonensis SB2B  Bacteria  normal  0.11601  normal  0.77091 
 
 
-
 
NC_011071  Smal_0463  TfoX domain protein  29.57 
 
 		 120 aa  42.7  0.002  Stenotrophomonas maltophilia R551-3  Bacteria  hitchhiker  0.000116495  normal  1 
 
 
-
 
NC_009656  PSPA7_5419  hypothetical protein  28.41 
 
 		 90 aa  40.8  0.006  Pseudomonas aeruginosa PA7  Bacteria  hitchhiker  0.00856887  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>