Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0749 |
Symbol | |
ID | 6109661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 827132 |
End bp | 827410 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641620508 |
Product | TfoX domain-containing protein |
Protein accession | YP_001747623 |
Protein GI | 170719935 |
COG category | [K] Transcription |
COG ID | [COG3070] Regulator of competence-specific genes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000282068 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000000743098 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACGATG AATTGCAGCA TCTGAAGAAT CTTGGAAAGA CCTCCGCGCA GTGGTTGCAT GCGGCCGGTA TCCACAGTGC ATCGGATTTG CGTCGACTCG GCGCGGTAGG TGCGTACCAG GCCGTGAAAA CCCGAGGATT CCGGGCGTCG AAGGTGTTGC TGTACGCCAT TGAAGGCGCG CTGCTGGACA TGCACTGGAA CGATTTGCCA GCCGAGCGCA AGCAAGCGCT CAATCAACAA CTCGATGCGA AATGCCCTGC GCAAAAAAAT GCGAAATAA
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Protein sequence | MNDELQHLKN LGKTSAQWLH AAGIHSASDL RRLGAVGAYQ AVKTRGFRAS KVLLYAIEGA LLDMHWNDLP AERKQALNQQ LDAKCPAQKN AK
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