Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4549 |
Symbol | |
ID | 5190712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5088846 |
End bp | 5089124 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640589029 |
Product | TfoX domain-containing protein |
Protein accession | YP_001269853 |
Protein GI | 148549751 |
COG category | [K] Transcription |
COG ID | [COG3070] Regulator of competence-specific genes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000271318 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000740957 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACGATG AATTGCAGCA TCTGAAGAAC CTTGGCAAGA CGTCTGCGCA GTGGCTGCAT GCAGCCGGCA TCCACAGTGC ATCGGATTTG CGCCGCCTGG GCGCGGTGGG TGCGTACCAG GCCGTGAAGA CACGAGGGTT CCGTGCATCG AAGGTGCTGT TGTATGCCAT TGAAGGCGCC CTGCTGGACA TGCACTGGAA CGATTTGCCG CTCGAACGCA AGGAAGCACT CAACCAACAA TTGGACGCGA AAAACCCTAC GCAAAAAAAA CCAAAATAA
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Protein sequence | MNDELQHLKN LGKTSAQWLH AAGIHSASDL RRLGAVGAYQ AVKTRGFRAS KVLLYAIEGA LLDMHWNDLP LERKEALNQQ LDAKNPTQKK PK
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