Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4683 |
Symbol | |
ID | 5872494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5233729 |
End bp | 5234007 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641549819 |
Product | TfoX domain-containing protein |
Protein accession | YP_001670905 |
Protein GI | 167035674 |
COG category | [K] Transcription |
COG ID | [COG3070] Regulator of competence-specific genes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000241401 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 1.50639e-16 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAACGATG AATTGCAGCA CCTGAAGAAC CTTGGCAAGA CCTCTGCGCA GTGGCTGCAT GCCGCCGGCA TCCACAGCGC ATCGGATCTG CGCCGCCTGG GTGCGGTGGG TGCATACCAG GCCGTGAAGA CACGAGGGTT CCGCGCCTCC AAGGTGCTGT TGTACGCCAT CGAAGGCGCC CTGCTGGACA TGCACTGGAA CGATTTGCCG CTCGAACGTA AGGAAGCGCT AAACCAACAA CTGGACGCGA AAAGCCCTAC GCAAAAAAAT CCAAAATAA
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Protein sequence | MNDELQHLKN LGKTSAQWLH AAGIHSASDL RRLGAVGAYQ AVKTRGFRAS KVLLYAIEGA LLDMHWNDLP LERKEALNQQ LDAKSPTQKN PK
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