14 homologs were found in PanDaTox collection
for query gene Swit_0319 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_0319  phytanoyl-CoA dioxygenase  100 
 
 
328 aa  671    Sphingomonas wittichii RW1  Bacteria  normal  0.533588  normal 
 
 
-
 
NC_009511  Swit_0327  phytanoyl-CoA dioxygenase  31.27 
 
 
318 aa  140  3e-32  Sphingomonas wittichii RW1  Bacteria  normal  0.131272  normal 
 
 
-
 
NC_013131  Caci_4291  Phytanoyl-CoA dioxygenase  31.92 
 
 
302 aa  136  4e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.768116  hitchhiker  0.00438427 
 
 
-
 
NC_010512  Bcenmc03_6819  phytanoyl-CoA dioxygenase  28.53 
 
 
327 aa  131  1.0000000000000001e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0935  Phytanoyl-CoA dioxygenase  31.37 
 
 
313 aa  80.1  0.00000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130252  normal 
 
 
-
 
NC_007484  Noc_1391  phytanoyl-CoA dioxygenase  25.82 
 
 
251 aa  55.1  0.000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.633515  n/a   
 
 
-
 
NC_011369  Rleg2_2355  Phytanoyl-CoA dioxygenase  25 
 
 
307 aa  52  0.00001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.59203  normal  0.340098 
 
 
-
 
NC_012850  Rleg_2678  Phytanoyl-CoA dioxygenase  26.95 
 
 
307 aa  52.4  0.00001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3519  Phytanoyl-CoA dioxygenase  25 
 
 
295 aa  49.7  0.00007  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.613414 
 
 
-
 
NC_013037  Dfer_3838  Phytanoyl-CoA dioxygenase  22.54 
 
 
272 aa  49.7  0.00007  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.591246 
 
 
-
 
NC_013172  Bfae_28650  protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin  25.99 
 
 
258 aa  47.8  0.0003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0569  hypothetical protein  25.74 
 
 
284 aa  45.4  0.001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1224  Phytanoyl-CoA dioxygenase  25.59 
 
 
253 aa  45.8  0.001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.335805  normal 
 
 
-
 
NC_007947  Mfla_1239  phytanoyl-CoA dioxygenase  30.39 
 
 
295 aa  43.1  0.006  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.424145 
 
 
-
 
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